RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA980585" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 3 ✖

bioproject 1

  • PRJNA980585 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29394647 29394647 PRJNA980585_P_NODE_15609_length_354_cov_3.156584_g15355_i0 PRJNA980585 15609 354 3.156584 11.17430736 Solumvirus sp. 2487773 Viruses Viruses 116 9.15e-30   NR AYV86227.1 2487773 g15355 i0 56 0.923728813559322 109 46 90.7 2 322 2 28 136 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 327 116 1 Viruses Pithoviruses             Solumvirus sp.
30816045 30816045 PRJNA980585_P_NODE_31394_length_276_cov_1.177340_g31140_i0 PRJNA980585 31394 276 1.17734 3.2494584 Pithovirus LCPAC1 2506587 Viruses Viruses 57.8 2.8e-7   NR QBK90293.1 2506587 g31140 i0 39.4 1.02173913043478 94 52 97.8 4 272 3 375 467 QBK90293.1 MAG: hypothetical protein LCPAC102_02060 [Pithovirus LCPAC102] diamond 282 57.8 1 Viruses Pithoviruses             Pithovirus LCPAC102
32397469 32397469 PRJNA980585_P_NODE_43179_length_250_cov_0.870056_g42925_i0 PRJNA980585 43179 250 0.870056 2.17514 Pithovirus LCPAC1 2506586 Viruses Viruses 84 5.37e-17   NR QBK89984.1 2506586 g42925 i0 52.6 0.912 76 32 91.2 2 12 239 126 197 QBK89984.1 MAG: phosphoribosyl transferase domain protein [Pithovirus LCPAC101] diamond 228 84 1 Viruses Pithoviruses             Pithovirus LCPAC101

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;