RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA977246" and tax_phylum = "Kitrinoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA977246 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29520846 29520846 PRJNA977246_S_NODE_6470_length_628_cov_3.697830_g5708_i0 PRJNA977246 6470 628 3.69783 23.2223724 Erysiphe necator associated flexivirus 2 2743099 Viruses Viruses 380 2.6e-118   NR QKN22646.1 2743099 g5708 i0 87 0.993630573248408 208 27 99.4 0 4 627 1703 1910 QKN22646.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 2] diamond 624 380 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 2
30184093 30184093 PRJNA977246_S_NODE_5932_length_659_cov_278.347619_g5210_i0 PRJNA977246 5932 659 278.347619 1834.31080921 Erysiphe necator associated virga-like virus 6 2743133 Viruses Viruses 167 1.6799999999999996e-43   NR QKN22665.1 2743133 g5210 i0 57.4 0.641881638846737 141 59 63.7 1 34 453 1004 1144 QKN22665.1 RNA-dependent RNA polymerase [Erysiphe necator associated virga-like virus 6] diamond 423 167 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Erysiphe necator associated virga-like virus 6
31827575 31827575 PRJNA977246_S_NODE_1437_length_1579_cov_12.667097_g1250_i0 PRJNA977246 1437 1579 12.667097 200.01346163 Grapevine wood holobiome associated deltaflexivirus 2 3384488 Viruses Viruses 56.2 5.08e-5   NR XLE34830.1 3384488 g1250 i0 29.8 0.267891070297657 141 90 26 2 518 928 62 197 XLE34830.1 hypothetical protein [Grapevine wood holobiome associated deltaflexivirus 2] diamond 423 56.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Grapevine wood holobiome associated deltaflexivirus 2
32087063 32087063 PRJNA977246_S_NODE_49878_length_154_cov_2.640000_g48886_i0 PRJNA977246 49878 154 2.64 4.0656 Tobamovirus 12234 Viruses Viruses 58.9 2.17e-8   NR QED22727.1 2601607 g48886 i0 53.1 3.72077922077922 49 23 95.5 0 1 147 1052 1100 QED22727.1 RNA-dependent RNA polymerase [Botryosphaeria dothidea tobamo-like virus] diamond 573 58.9 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Botryosphaeria dothidea tobamo-like virus
32460686 32460686 PRJNA977246_S_NODE_15139_length_375_cov_8.401734_g14149_i0 PRJNA977246 15139 375 8.401734 31.5065025 Erysiphe necator associated flexivirus 2 2743099 Viruses Viruses 129 8.25e-32   NR QKN22646.1 2743099 g14149 i0 82.7 0.6 75 13 60 0 1 225 1902 1976 QKN22646.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 2] diamond 225 129 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 2
32649666 32649666 PRJNA977246_S_NODE_43300_length_171_cov_2.147887_g42308_i0 PRJNA977246 43300 171 2.147887 3.67288677 Erysiphe necator associated flexivirus 2 2743099 Viruses Viruses 53.1 2.97e-6   NR QKN22646.1 2743099 g42308 i0 89.7 0.508771929824561 29 3 50.9 0 81 167 1677 1705 QKN22646.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 2] diamond 87 53.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;