RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA977246" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA977246 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29621262 29621262 PRJNA977246_S_NODE_49930_length_154_cov_2.312000_g48938_i0 PRJNA977246 49930 154 2.312 3.56048 root 1 Root_unresolved Root_unresolved 48.1 2.81e-5   NR WP_130129199.1 59932 g48938 i0 56.8 1.71428571428571 44 17 85.7 1 19 150 68 109 WP_130129199.1 nucleoside triphosphate pyrophosphohydrolase family protein [Synechococcus sp. WH 8101] diamond 264 48.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. WH 8101
31890995 31890995 PRJNA977246_S_NODE_38677_length_186_cov_3.369427_g37685_i0 PRJNA977246 38677 186 3.369427 6.26713422 uncultured Microcoleus sp. 259945 Bacteria Bacteria 44.3 6.28e-4   NR CAA9391246.1 259945 g37685 i0 66.7 0.532258064516129 33 11 53.2 0 86 184 2 34 CAA9391246.1 hypothetical protein AVDCRST_MAG84-5622 [uncultured Microcoleus sp.] diamond 99 44.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Microcoleus uncultured Microcoleus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;