contig_metadata
16 rows where analysis = "diamond", bioproject = "PRJNA977246" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6372780 | 6372780 | PRJNA977246_S_NODE_14605_length_384_cov_5158.016901_g13616_i0 | PRJNA977246 | 14605 | 384 | 5158.016901 | 19806.78489984 | Chlamydomonas eustigma | 1157962 | Plants | Plants | 120 | 6.86e-30 | NR | GAX81867.1 | 1157962 | g13616 | i0 | 65.9 | 1.953125 | 91 | 27 | 71.1 | 1 | 366 | 94 | 266 | 352 | GAX81867.1 hypothetical protein CEUSTIGMA_g9295.t1 [Chlamydomonas eustigma] | diamond | 750 | 120 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas eustigma | |
| 7329207 | 7329207 | PRJNA977246_S_NODE_35326_length_200_cov_2.403509_g34334_i0 | PRJNA977246 | 35326 | 200 | 2.403509 | 4.807018 | Scenedesmus sp. NREL 46B-D3 | 2650976 | Plants | Plants | 129 | 7.400000000000001e-34 | NR | KAF6254444.1 | 2650976 | g34334 | i0 | 98.5 | 1.965 | 66 | 1 | 99 | 0 | 1 | 198 | 283 | 348 | KAF6254444.1 sedoheptulose-1,7-biphosphatase [Scenedesmus sp. NREL 46B-D3] | diamond | 393 | 129 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Scenedesmus | Scenedesmus sp. NREL 46B-D3 | |
| 12430122 | 12430122 | PRJNA977246_S_NODE_14590_length_385_cov_2.140449_g13602_i0 | PRJNA977246 | 14590 | 385 | 2.140449 | 8.24072865 | Chlorophyta | 3041 | Plants | Plants | 189 | 1.89e-59 | NR | XP_005645013.1 | 574566 | g13602 | i0 | 91 | 9.35064935064935 | 100 | 9 | 77.9 | 0 | 3 | 302 | 31 | 130 | XP_005645013.1 ribosomal protein S15a component of cytosolic 80S ribosome and 40S small subunit [Coccomyxa subellipsoidea C-169] | diamond | 3600 | 189 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea | ||
| 15296603 | 15296603 | PRJNA977246_S_NODE_10012_length_484_cov_4190.692308_g9089_i0 | PRJNA977246 | 10012 | 484 | 4190.692308 | 20282.95077072 | Coccomyxa viridis | 1274662 | Plants | Plants | 144 | 2.09e-39 | NR | CAL5220391.1 | 1274662 | g9089 | i0 | 88.8 | 0.495867768595041 | 80 | 9 | 49.6 | 0 | 317 | 78 | 50 | 129 | CAL5220391.1 g2398 [Coccomyxa viridis] | diamond | 240 | 144 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa viridis | ||
| 15296868 | 15296868 | PRJNA977246_S_NODE_34692_length_202_cov_10924.005780_g33700_i0 | PRJNA977246 | 34692 | 202 | 10924.00578 | 22066.4916756 | Coccomyxa viridis | 1274662 | Plants | Plants | 70.5 | 2.49e-12 | NR | CAL5219012.1 | 1274662 | g33700 | i0 | 84.1 | 0.653465346534653 | 44 | 6 | 63.9 | 1 | 51 | 179 | 283 | 326 | CAL5219012.1 g768 [Coccomyxa viridis] | diamond | 132 | 70.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa viridis | ||
| 26899651 | 26899651 | PRJNA977246_S_NODE_28461_length_236_cov_3.444444_g27469_i0 | PRJNA977246 | 28461 | 236 | 3.444444 | 8.12888784 | Chlorella desiccata (nom. nud.) | 1650286 | Plants | Plants | 103 | 5.99e-25 | NR | KAL4519373.1 | 1650286 | g27469 | i0 | 83 | 2.02118644067797 | 53 | 9 | 67.4 | 0 | 25 | 183 | 210 | 262 | KAL4519373.1 hypothetical protein Ndes2526A_g00461 [Chlorella desiccata (nom. nud.)] | diamond | 477 | 103 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Nannochloris | Nannochloris sp. 'desiccata' | |
| 26899659 | 26899659 | PRJNA977246_S_NODE_43201_length_171_cov_2.922535_g42209_i0 | PRJNA977246 | 43201 | 171 | 2.922535 | 4.99753485 | Coccomyxa viridis | 1274662 | Plants | Plants | 60.1 | 3.07e-10 | NR | CAK0753880.1 | 1274662 | g42209 | i0 | 71.2 | 0.912280701754386 | 52 | 14 | 89.5 | 1 | 7 | 159 | 5 | 56 | CAK0753880.1 hypothetical protein CVIRNUC_002254 [Coccomyxa viridis] | diamond | 156 | 60.1 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa viridis | ||
| 27089464 | 27089464 | PRJNA977246_S_NODE_44202_length_168_cov_3.294964_g43210_i0 | PRJNA977246 | 44202 | 168 | 3.294964 | 5.53553952 | Coccomyxa viridis | 1274662 | Plants | Plants | 97.1 | 9.9e-22 | NR | CAL5229584.1 | 1274662 | g43210 | i0 | 93 | 1.53571428571429 | 43 | 3 | 76.8 | 0 | 166 | 38 | 635 | 677 | CAL5229584.1 g12940 [Coccomyxa viridis] | diamond | 258 | 97.1 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa viridis | ||
| 28194555 | 28194555 | PRJNA977246_S_NODE_46946_length_161_cov_2.401515_g45954_i0 | PRJNA977246 | 46946 | 161 | 2.401515 | 3.86643915 | Chlorella variabilis | 554065 | Plants | Plants | 71.6 | 7.23e-13 | NR | XP_005851505.1 | 554065 | g45954 | i0 | 73.1 | 1.93788819875776 | 52 | 14 | 96.9 | 0 | 2 | 157 | 336 | 387 | XP_005851505.1 hypothetical protein CHLNCDRAFT_33857 [Chlorella variabilis] | diamond | 312 | 71.6 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella variabilis | |
| 29116713 | 29116713 | PRJNA977246_S_NODE_49928_length_154_cov_2.336000_g48936_i0 | PRJNA977246 | 49928 | 154 | 2.336 | 3.59744 | Scenedesmaceae | 3086 | Plants | Plants | 92.8 | 1.27e-21 | NR | 8CMO_6 | 75800 | g48936 | i0 | 86 | 2.92207792207792 | 50 | 7 | 97.4 | 0 | 3 | 152 | 50 | 99 | 8CMO_6 Chain 6, Light-harvesting protein of photosystem I Lhca6 [Coelastrella] | diamond | 450 | 93.2 | 0.995708154506438 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Coelastrella | ||
| 29211437 | 29211437 | PRJNA977246_S_NODE_10369_length_474_cov_3.723596_g9440_i0 | PRJNA977246 | 10369 | 474 | 3.723596 | 17.64984504 | Trebouxia | 13786 | Plants | Plants | 92.4 | 1.18e-18 | NR | KAA6423678.1 | 2608996 | g9440 | i0 | 79.6 | 2.0253164556962 | 54 | 11 | 34.2 | 0 | 108 | 269 | 361 | 414 | KAA6423678.1 MAG: phosphoribulokinase precursor [Trebouxia sp. A1-2] | diamond | 960 | 92.4 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia sp. A1-2 | |
| 29211439 | 29211439 | PRJNA977246_S_NODE_46649_length_162_cov_1.556391_g45657_i0 | PRJNA977246 | 46649 | 162 | 1.556391 | 2.52135342 | Selenastraceae | 35466 | Plants | Plants | 88.2 | 1.55e-19 | NR | KAI8462589.1 | 39955 | g45657 | i0 | 76 | 2.77777777777778 | 50 | 12 | 92.6 | 0 | 3 | 152 | 127 | 176 | KAI8462589.1 MAG: light-harvesting chlorophyll a/b-binding protein Lhca5 [Monoraphidium minutum] | diamond | 450 | 88.2 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium minutum | |
| 29299847 | 29299847 | PRJNA977246_S_NODE_21869_length_290_cov_4.007663_g20877_i0 | PRJNA977246 | 21869 | 290 | 4.007663 | 11.6222227 | Gonium pectorale | 33097 | Plants | Plants | 43.5 | 0.0202 | NR | KXZ45670.1 | 33097 | g20877 | i0 | 87 | 0.941379310344828 | 23 | 3 | 23.8 | 0 | 21 | 89 | 150 | 172 | KXZ45670.1 hypothetical protein GPECTOR_52g68 [Gonium pectorale] | diamond | 273 | 43.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Volvocaceae | Gonium | Gonium pectorale | |
| 30190166 | 30190166 | PRJNA977246_S_NODE_39652_length_183_cov_1.805195_g38660_i0 | PRJNA977246 | 39652 | 183 | 1.805195 | 3.30350685 | Trebouxiales | 2507901 | Plants | Plants | 103 | 4.5e-24 | NR | XP_005650521.1 | 574566 | g38660 | i0 | 83.3 | 3.9344262295082 | 60 | 10 | 98.4 | 0 | 3 | 182 | 559 | 618 | XP_005650521.1 hypothetical protein COCSUDRAFT_22213 [Coccomyxa subellipsoidea C-169] | diamond | 720 | 103 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea | ||
| 31258409 | 31258409 | PRJNA977246_S_NODE_13395_length_406_cov_4.405836_g12415_i0 | PRJNA977246 | 13395 | 406 | 4.405836 | 17.88769416 | Coccomyxa viridis | 1274662 | Plants | Plants | 80.9 | 2.32e-15 | NR | CAL5220391.1 | 1274662 | g12415 | i0 | 86 | 0.369458128078818 | 50 | 7 | 36.9 | 0 | 228 | 377 | 1 | 50 | CAL5220391.1 g2398 [Coccomyxa viridis] | diamond | 150 | 80.9 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa viridis | ||
| 31802093 | 31802093 | PRJNA977246_S_NODE_39037_length_185_cov_2.519231_g38045_i0 | PRJNA977246 | 39037 | 185 | 2.519231 | 4.66057735 | Volvox | 3066 | Plants | Plants | 46.2 | 4.02e-4 | NR | XP_002945815.1 | 3068 | g38045 | i0 | 92 | 1.21621621621622 | 25 | 2 | 40.5 | 0 | 2 | 76 | 117 | 141 | XP_002945815.1 uncharacterized protein VOLCADRAFT_109549 [Volvox carteri f. nagariensis] | diamond | 225 | 46.6 | 0.991416309012876 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Volvocaceae | Volvox | Volvox carteri |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;