contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA976345" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26772864 | 26772864 | PRJNA976345_P_NODE_16701_length_414_cov_2.034301_g15112_i0 | PRJNA976345 | 16701 | 414 | 2.034301 | 8.42200614 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 170 | 2.75e-49 | NR | MFA6734489.1 | 2791017 | g15112 | i0 | 63 | 0.978260869565217 | 135 | 50 | 97.8 | 0 | 2 | 406 | 138 | 272 | MFA6734489.1 DUF932 domain-containing protein [Sphaerochaetaceae bacterium] | diamond | 405 | 170 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 26962601 | 26962601 | PRJNA976345_P_NODE_21862_length_360_cov_2.378462_g20262_i0 | PRJNA976345 | 21862 | 360 | 2.378462 | 8.5624632 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 189 | 1.9e-55 | NR | HRV29226.1 | 2053615 | g20262 | i0 | 89.7 | 0.891666666666667 | 107 | 11 | 89.2 | 0 | 323 | 3 | 200 | 306 | HRV29226.1 hypothetical protein [Spirochaetia bacterium] | diamond | 321 | 189 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 27374057 | 27374057 | PRJNA976345_P_NODE_79563_length_206_cov_2.222222_g77955_i0 | PRJNA976345 | 79563 | 206 | 2.222222 | 4.57777732 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 42.7 | 0.0222 | NR | MCX7811863.1 | 2026757 | g77955 | i0 | 55.6 | 0.655339805825243 | 45 | 18 | 65.5 | 1 | 188 | 54 | 114 | 156 | MCX7811863.1 alpha/beta hydrolase [Leptospiraceae bacterium] | diamond | 135 | 42.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 30152181 | 30152181 | PRJNA976345_P_NODE_19552_length_381_cov_2.387283_g17955_i0 | PRJNA976345 | 19552 | 381 | 2.387283 | 9.09554823 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 179 | 9.219999999999999e-54 | NR | HRS66228.1 | 2053615 | g17955 | i0 | 78.1 | 0.826771653543307 | 105 | 23 | 82.7 | 0 | 379 | 65 | 144 | 248 | HRS66228.1 hypothetical protein [Spirochaetia bacterium] | diamond | 315 | 179 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 30247428 | 30247428 | PRJNA976345_P_NODE_151072_length_166_cov_1.221374_g149464_i0 | PRJNA976345 | 151072 | 166 | 1.221374 | 2.02748084 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 100 | 7.879999999999999e-23 | NR | HRV29560.1 | 2053615 | g149464 | i0 | 100 | 0.975903614457831 | 54 | 0 | 97.6 | 0 | 164 | 3 | 300 | 353 | HRV29560.1 Rho termination factor N-terminal domain-containing protein [Spirochaetia bacterium] | diamond | 162 | 100 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 30374049 | 30374049 | PRJNA976345_P_NODE_75972_length_210_cov_1.525714_g74364_i0 | PRJNA976345 | 75972 | 210 | 1.525714 | 3.2039994 | Leptospira brenneri | 2023182 | Bacteria | Bacteria | 42 | 0.0414 | NR | WP_100792319.1 | 2023182 | g74364 | i0 | 38.9 | 0.771428571428571 | 54 | 32 | 77.1 | 1 | 162 | 1 | 3 | 55 | WP_100792319.1 hypothetical protein [Leptospira brenneri] | diamond | 162 | 42 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira brenneri | ||
| 30380183 | 30380183 | PRJNA976345_P_NODE_181292_length_155_cov_1.708333_g179684_i0 | PRJNA976345 | 181292 | 155 | 1.708333 | 2.64791615 | Bacteria | 2 | Bacteria | Bacteria | 65.1 | 6.93e-11 | NR | MCL2180279.1 | 166 | g179684 | i0 | 82.5 | 9.29032258064516 | 40 | 7 | 77.4 | 0 | 120 | 1 | 15 | 54 | MCL2180279.1 NAD(+) synthase [Treponema sp.] | diamond | 1440 | 65.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 32175916 | 32175916 | PRJNA976345_P_NODE_175178_length_157_cov_1.622951_g173570_i0 | PRJNA976345 | 175178 | 157 | 1.622951 | 2.54803307 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 91.3 | 6.04e-20 | NR | HRS66670.1 | 2053615 | g173570 | i0 | 92.3 | 2.98089171974522 | 52 | 4 | 99.4 | 0 | 2 | 157 | 292 | 343 | HRS66670.1 hypothetical protein [Spirochaetia bacterium] | diamond | 468 | 91.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 32428886 | 32428886 | PRJNA976345_P_NODE_115579_length_180_cov_1.917241_g113971_i0 | PRJNA976345 | 115579 | 180 | 1.917241 | 3.4510338 | Treponema sp. OMZ 799 | 2563668 | Bacteria | Bacteria | 42 | 0.0295 | NR | WP_253707661.1 | 2563668 | g113971 | i0 | 42.6 | 0.783333333333333 | 47 | 21 | 78.3 | 1 | 170 | 30 | 208 | 248 | WP_253707661.1 JAB domain-containing protein [Treponema sp. OMZ 799] | diamond | 141 | 42 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 799 | ||
| 32524038 | 32524038 | PRJNA976345_P_NODE_15939_length_424_cov_3.776350_g14352_i0 | PRJNA976345 | 15939 | 424 | 3.77635 | 16.011724 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 57 | 2.47e-6 | NR | GHV60830.1 | 2053615 | g14352 | i0 | 61 | 0.290094339622642 | 41 | 16 | 29 | 0 | 420 | 298 | 153 | 193 | GHV60830.1 hypothetical protein AGMMS49587_03450 [Spirochaetia bacterium] | diamond | 123 | 57 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 32524046 | 32524046 | PRJNA976345_P_NODE_175219_length_157_cov_1.614754_g173611_i0 | PRJNA976345 | 175219 | 157 | 1.614754 | 2.53516378 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 38.9 | 0.0446 | NR | HRV29504.1 | 2053615 | g173611 | i0 | 100 | 0.32484076433121 | 17 | 0 | 32.5 | 0 | 107 | 157 | 1 | 17 | HRV29504.1 hypothetical protein [Spirochaetia bacterium] | diamond | 51 | 38.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 32712862 | 32712862 | PRJNA976345_P_NODE_72280_length_214_cov_1.530726_g70672_i0 | PRJNA976345 | 72280 | 214 | 1.530726 | 3.27575364 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 122 | 1.5199999999999998e-31 | NR | HRS66611.1 | 2053615 | g70672 | i0 | 87.9 | 1.85046728971963 | 66 | 8 | 92.5 | 0 | 2 | 199 | 247 | 312 | HRS66611.1 SUMF1/EgtB/PvdO family nonheme iron enzyme [Spirochaetia bacterium] | diamond | 396 | 122 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 32870316 | 32870316 | PRJNA976345_P_NODE_92180_length_195_cov_2.762500_g90572_i0 | PRJNA976345 | 92180 | 195 | 2.7625 | 5.386875 | Treponema sp. | 166 | Bacteria | Bacteria | 122 | 6.679999999999999e-32 | NR | MFC2602318.1 | 166 | g90572 | i0 | 89.2 | 1 | 65 | 7 | 100 | 0 | 195 | 1 | 56 | 120 | MFC2602318.1 tRNA pseudouridine(55) synthase TruB [Treponema sp.] | diamond | 195 | 122 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;