RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA976345" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA976345 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27405463 27405463 PRJNA976345_P_NODE_110403_length_183_cov_1.912162_g108795_i0 PRJNA976345 110403 183 1.912162 3.49925646 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 71.2 1.43e-12   NR XP_002669531.1 5762 g108795 i0 56.7 0.983606557377049 60 26 98.4 0 2 181 170 229 XP_002669531.1 uncharacterized protein NAEGRDRAFT_59916 [Naegleria gruberi] diamond 180 71.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29299770 29299770 PRJNA976345_P_NODE_48849_length_250_cov_1.106977_g47241_i0 PRJNA976345 48849 250 1.106977 2.7674425 Acrasis kona 1008807 Heterolobosea other_Eukaryota 60.1 3.11e-8   NR KAL0486982.1 1008807 g47241 i0 41.3 0.96 80 44 92.4 1 250 20 376 455 KAL0486982.1 low-specificity L-threonine aldolase [Acrasis kona] diamond 240 60.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29457325 29457325 PRJNA976345_P_NODE_62650_length_226_cov_1.246073_g61042_i0 PRJNA976345 62650 226 1.246073 2.81612498 Acrasis kona 1008807 Heterolobosea other_Eukaryota 78.2 1.55e-15   NR KAL0485169.1 1008807 g61042 i0 48.7 1.00884955752212 76 36 98.2 2 3 224 59 133 KAL0485169.1 hypothetical protein AKO1_004281 [Acrasis kona] diamond 228 78.2 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30500005 30500005 PRJNA976345_P_NODE_165853_length_160_cov_1.880000_g164245_i0 PRJNA976345 165853 160 1.88 3.008 Acrasis kona 1008807 Heterolobosea other_Eukaryota 88.6 7.8e-19   NR KAL0487357.1 1008807 g164245 i0 78.4 0.95625 51 11 95.6 0 157 5 284 334 KAL0487357.1 aquaporin [Acrasis kona] diamond 153 88.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32270795 32270795 PRJNA976345_P_NODE_67358_length_219_cov_3.820652_g65750_i0 PRJNA976345 67358 219 3.820652 8.36722788 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 46.2 0.00132   NR XP_044563551.1 5763 g65750 i0 38.2 1.86301369863014 68 39 89 2 2 196 35 102 XP_044563551.1 uncharacterized protein FDP41_001908 [Naegleria fowleri] diamond 408 46.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;