contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA976345" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27721531 | 27721531 | PRJNA976345_P_NODE_36464_length_283_cov_1.911290_g34857_i0 | PRJNA976345 | 36464 | 283 | 1.91129 | 5.4089507 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 96.3 | 6.180000000000001e-21 | NR | MCR4338773.1 | 2026741 | g34857 | i0 | 57.1 | 0.890459363957597 | 84 | 29 | 89 | 2 | 30 | 281 | 52 | 128 | MCR4338773.1 site-specific DNA-methyltransferase [Gemmatimonadaceae bacterium] | diamond | 252 | 96.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 27815980 | 27815980 | PRJNA976345_P_NODE_199324_length_150_cov_1.382609_g197716_i0 | PRJNA976345 | 199324 | 150 | 1.382609 | 2.0739135 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 75.5 | 2.16e-14 | NR | MEJ2218503.1 | 2026742 | g197716 | i0 | 68.1 | 1.88 | 47 | 15 | 94 | 0 | 8 | 148 | 170 | 216 | MEJ2218503.1 HNH endonuclease domain-containing protein [Gemmatimonadota bacterium] | diamond | 282 | 75.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28731504 | 28731504 | PRJNA976345_P_NODE_73647_length_212_cov_2.242938_g72039_i0 | PRJNA976345 | 73647 | 212 | 2.242938 | 4.75502856 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 57 | 2.31e-7 | NR | TVP45187.1 | 2448054 | g72039 | i0 | 42 | 1.9811320754717 | 69 | 40 | 97.6 | 0 | 3 | 209 | 67 | 135 | TVP45187.1 MAG: NAD-dependent DNA ligase LigA [Gemmatimonadales bacterium] | diamond | 420 | 57 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29053486 | 29053486 | PRJNA976345_P_NODE_111828_length_182_cov_2.170068_g110220_i0 | PRJNA976345 | 111828 | 182 | 2.170068 | 3.94952376 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 117 | 1.49e-29 | NR | HEX6058158.1 | 2026741 | g110220 | i0 | 83.3 | 8.88461538461539 | 60 | 10 | 98.9 | 0 | 181 | 2 | 330 | 389 | HEX6058158.1 serine hydrolase [Gemmatimonadaceae bacterium] | diamond | 1617 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29173610 | 29173610 | PRJNA976345_P_NODE_144149_length_169_cov_1.194030_g142541_i0 | PRJNA976345 | 144149 | 169 | 1.19403 | 2.0179107 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 107 | 2.9e-25 | NR | MEX2583338.1 | 2026742 | g142541 | i0 | 87.5 | 1.98816568047337 | 56 | 7 | 99.4 | 0 | 169 | 2 | 393 | 448 | MEX2583338.1 translation elongation factor 4 [Gemmatimonadota bacterium] | diamond | 336 | 107 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30089145 | 30089145 | PRJNA976345_P_NODE_123752_length_178_cov_2.069930_g122144_i0 | PRJNA976345 | 123752 | 178 | 2.06993 | 3.6844754 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 45.4 | 0.0017 | NR | MEO6529155.1 | 2026741 | g122144 | i0 | 84 | 0.825842696629214 | 25 | 4 | 42.1 | 0 | 104 | 178 | 135 | 159 | MEO6529155.1 dihydropteroate synthase [Gemmatimonadaceae bacterium] | diamond | 147 | 45.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30474716 | 30474716 | PRJNA976345_P_NODE_120773_length_178_cov_2.510490_g119165_i0 | PRJNA976345 | 120773 | 178 | 2.51049 | 4.4686722 | Bacteria | 2 | Bacteria | Bacteria | 48.5 | 1.12e-4 | NR | HKV50085.1 | 2026741 | g119165 | i0 | 91.7 | 2.42696629213483 | 24 | 2 | 40.4 | 0 | 73 | 2 | 72 | 95 | HKV50085.1 DUF305 domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 432 | 48.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31037411 | 31037411 | PRJNA976345_P_NODE_149895_length_166_cov_2.160305_g148287_i0 | PRJNA976345 | 149895 | 166 | 2.160305 | 3.5861063 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 57 | 2.08e-8 | NR | HJP60985.1 | 2026741 | g148287 | i0 | 71.4 | 10.1024096385542 | 35 | 10 | 63.3 | 0 | 1 | 105 | 10 | 44 | HJP60985.1 VOC family protein [Gemmatimonadaceae bacterium] | diamond | 1677 | 57 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31669507 | 31669507 | PRJNA976345_P_NODE_77137_length_209_cov_1.120690_g75529_i0 | PRJNA976345 | 77137 | 209 | 1.12069 | 2.3422421 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 115 | 8.3e-30 | NR | HEY8196907.1 | 2448054 | g75529 | i0 | 75.4 | 0.990430622009569 | 69 | 17 | 99 | 0 | 207 | 1 | 63 | 131 | HEY8196907.1 DUF2490 domain-containing protein [Gemmatimonadales bacterium] | diamond | 207 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 32649538 | 32649538 | PRJNA976345_P_NODE_104400_length_187_cov_1.401316_g102792_i0 | PRJNA976345 | 104400 | 187 | 1.401316 | 2.62046092 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 94 | 1.62e-20 | NR | HEU0299428.1 | 2029185 | g102792 | i0 | 64.5 | 0.994652406417112 | 62 | 22 | 99.5 | 0 | 187 | 2 | 458 | 519 | HEU0299428.1 S8 family serine peptidase [Longimicrobium sp.] | diamond | 186 | 94 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;