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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA976345" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA976345 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21349816 21349816 PRJNA976345_P_NODE_127317_length_177_cov_1.126761_g125709_i0 PRJNA976345 127317 177 1.126761 1.99436697 Euglena gracilis 3039 Euglenozoa other_Eukaryota 76.6 4.8e-15   NR QLA09567.1 3039 g125709 i0 81 0.711864406779661 42 8 71.2 0 175 50 208 249 QLA09567.1 40S small subunit ribosomal protein uS5 [Euglena gracilis] diamond 126 76.6 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
22624934 22624934 PRJNA976345_P_NODE_143458_length_169_cov_1.768657_g141850_i0 PRJNA976345 143458 169 1.768657 2.98903033 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 103 1.24e-26   NR QLA09569.1 3039 g141850 i0 85.5 4.88165680473373 55 8 97.6 0 3 167 68 122 QLA09569.1 40S small subunit ribosomal protein uS8 [Euglena gracilis] diamond 825 103 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
27405463 27405463 PRJNA976345_P_NODE_110403_length_183_cov_1.912162_g108795_i0 PRJNA976345 110403 183 1.912162 3.49925646 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 71.2 1.43e-12   NR XP_002669531.1 5762 g108795 i0 56.7 0.983606557377049 60 26 98.4 0 2 181 170 229 XP_002669531.1 uncharacterized protein NAEGRDRAFT_59916 [Naegleria gruberi] diamond 180 71.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29299770 29299770 PRJNA976345_P_NODE_48849_length_250_cov_1.106977_g47241_i0 PRJNA976345 48849 250 1.106977 2.7674425 Acrasis kona 1008807 Heterolobosea other_Eukaryota 60.1 3.11e-8   NR KAL0486982.1 1008807 g47241 i0 41.3 0.96 80 44 92.4 1 250 20 376 455 KAL0486982.1 low-specificity L-threonine aldolase [Acrasis kona] diamond 240 60.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29362997 29362997 PRJNA976345_P_NODE_39149_length_274_cov_4.075314_g37542_i0 PRJNA976345 39149 274 4.075314 11.16636036 Angomonas deanei 59799 Euglenozoa other_Eukaryota 88.2 3.73e-18   NR CAD2220402.1 59799 g37542 i0 49.4 5.32116788321168 81 39 88.7 1 264 22 327 405 CAD2220402.1 Glutathione S-transferase, N-terminal domain/Glutathione S-transferase, C-terminal domain/Elongation factor 1 gamma, conserved domain containing protein, putative [Angomonas deanei] diamond 1458 88.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
29457325 29457325 PRJNA976345_P_NODE_62650_length_226_cov_1.246073_g61042_i0 PRJNA976345 62650 226 1.246073 2.81612498 Acrasis kona 1008807 Heterolobosea other_Eukaryota 78.2 1.55e-15   NR KAL0485169.1 1008807 g61042 i0 48.7 1.00884955752212 76 36 98.2 2 3 224 59 133 KAL0485169.1 hypothetical protein AKO1_004281 [Acrasis kona] diamond 228 78.2 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29583577 29583577 PRJNA976345_P_NODE_161270_length_162_cov_1.299213_g159662_i0 PRJNA976345 161270 162 1.299213 2.10472506 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 93.2 1.19e-22   NR KAJ9440170.1 91374 g159662 i0 79.2 2.92592592592593 53 11 98.1 0 3 161 46 98 KAJ9440170.1 60S ribosomal protein L26-2 [Diplonema papillatum] diamond 474 93.2 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29741538 29741538 PRJNA976345_P_NODE_47430_length_253_cov_1.766055_g45822_i0 PRJNA976345 47430 253 1.766055 4.46811915 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 55.8 9.72e-7   NR EPY28759.1 28005 g45822 i0 70.7 1.42292490118577 41 12 48.6 0 251 129 412 452 EPY28759.1 hypothetical protein STCU_04895 [Strigomonas culicis] diamond 360 55.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
30500005 30500005 PRJNA976345_P_NODE_165853_length_160_cov_1.880000_g164245_i0 PRJNA976345 165853 160 1.88 3.008 Acrasis kona 1008807 Heterolobosea other_Eukaryota 88.6 7.8e-19   NR KAL0487357.1 1008807 g164245 i0 78.4 0.95625 51 11 95.6 0 157 5 284 334 KAL0487357.1 aquaporin [Acrasis kona] diamond 153 88.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32270795 32270795 PRJNA976345_P_NODE_67358_length_219_cov_3.820652_g65750_i0 PRJNA976345 67358 219 3.820652 8.36722788 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 46.2 0.00132   NR XP_044563551.1 5763 g65750 i0 38.2 1.86301369863014 68 39 89 2 2 196 35 102 XP_044563551.1 uncharacterized protein FDP41_001908 [Naegleria fowleri] diamond 408 46.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
32587095 32587095 PRJNA976345_P_NODE_143819_length_169_cov_1.492537_g142211_i0 PRJNA976345 143819 169 1.492537 2.52238753 Euglena gracilis 3039 Euglenozoa other_Eukaryota 42.7 0.0118   NR QLA09620.1 3039 g142211 i0 58.8 0.603550295857988 34 14 60.4 0 15 116 176 209 QLA09620.1 60S large subunit ribosomal protein eL14 [Euglena gracilis] diamond 102 42.7 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
32901662 32901662 PRJNA976345_P_NODE_29180_length_312_cov_2.812274_g27575_i0 PRJNA976345 29180 312 2.812274 8.77429488 Rhabdomonas costata 118010 Euglenozoa other_Eukaryota 95.1 2.23e-21   NR ALR69548.1 118010 g27575 i0 60.3 1.93269230769231 68 27 65.4 0 307 104 183 250 ALR69548.1 triosephosphate isomerase, partial [Rhabdomonas costata] diamond 603 95.1 1 Eukaryota Discoba   Euglenozoa Euglenida Rhabdomonadales Astasiidae Rhabdomonas Rhabdomonas costata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;