RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA975724" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA975724 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
946609 946609 PRJNA975724_S_NODE_581_length_944_cov_8.104478_g483_i0 PRJNA975724 581 944 8.104478 76.50627232 Moloney murine leukemia virus 11801 Viruses Viruses 537 1.1299999999999998e-174   NR NP_057933.2 11801 g483 i0 97.5 0.883474576271186 278 7 88.3 0 2 835 1058 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 834 537 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
13699562 13699562 PRJNA975724_S_NODE_31_length_2426_cov_36.446239_g28_i0 PRJNA975724 31 2426 36.446239 884.18575814 Sopawar virus 3131855 Viruses Viruses 91.7 7.58e-15   NR WZH62023.1 3131855 g28 i0 28.2 0.946001648804617 291 196 35.9 5 897 1766 260 538 WZH62023.1 MAG: RNA-dependent RNA polymerase [Sopawar virus] diamond 2295 91.7 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Sopawar virus
16248336 16248336 PRJNA975724_S_NODE_15133_length_412_cov_2.648968_g14952_i0 PRJNA975724 15133 412 2.648968 10.91374816 Viruses 10239 Viruses Viruses 208 2.96e-63   NR XOE99880.1 2202644 g14952 i0 68.1 2.00242718446602 138 43 99.8 1 2 412 201 338 XOE99880.1 MAG: replication initiation protein [Microviridae sp.] diamond 825 208 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microviridae sp.
28225927 28225927 PRJNA975724_S_NODE_54506_length_289_cov_0.675926_g54325_i0 PRJNA975724 54506 289 0.675926 1.95342614 Escherichia phage Copypasta 3096133 Viruses Viruses 60.5 6.54e-10   NR WPH57058.1 3096133 g54325 i0 63.5 0.934256055363322 52 19 54 0 94 249 1 52 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 270 60.5 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29078863 29078863 PRJNA975724_S_NODE_91788_length_241_cov_0.880952_g91607_i0 PRJNA975724 91788 241 0.880952 2.12309432 Escherichia phage Copypasta 3096133 Viruses Viruses 55.5 3.5e-8   NR WPH57058.1 3096133 g91607 i0 60 0.622406639004149 50 20 62.2 0 181 32 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 55.5 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
30247403 30247403 PRJNA975724_S_NODE_8392_length_467_cov_6.862944_g8211_i0 PRJNA975724 8392 467 6.862944 32.04994848 Solumvirus sp. 2487773 Viruses Viruses 49.3 0.00109   NR AYV86227.1 2487773 g8211 i0 92.3 0.167023554603854 26 2 16.7 0 467 390 159 184 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 78 49.3 1 Viruses Pithoviruses             Solumvirus sp.
30437050 30437050 PRJNA975724_S_NODE_75013_length_255_cov_2.538462_g74832_i0 PRJNA975724 75013 255 2.538462 6.4730781 Phytophthora cinnamomi ormycovirus 2-25 3239321 Viruses Viruses 55.1 2.03e-6   NR XDO01615.1 3239321 g74832 i0 37 0.952941176470588 81 50 95.3 1 1 243 562 641 XDO01615.1 RNA-dependent RNA polymerase [Phytophthora cinnamomi ormycovirus 2-25] diamond 243 55.1 1 Viruses   Orthornavirae   Orpoviricetes Bormycovirales Deltanormycoviridae Bormycovirus Bormycovirus duphytophthorae
31037375 31037375 PRJNA975724_S_NODE_22375_length_376_cov_0.963696_g22194_i0 PRJNA975724 22375 376 0.963696 3.62349696 Escherichia phage Copypasta 3096133 Viruses Viruses 78.2 1.86e-16   NR WPH57058.1 3096133 g22194 i0 71.2 0.414893617021277 52 15 41.5 0 181 336 1 52 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 156 78.2 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31922525 31922525 PRJNA975724_S_NODE_517_length_979_cov_7.325607_g426_i0 PRJNA975724 517 979 7.325607 71.71769253 Gammaretrovirus murleu 3428959 Viruses Viruses 650 1.1299999999999996e-232   NR 8WUS_E 11801 g426 i0 99.1 7.82022471910112 319 3 97.8 0 977 21 28 346 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 7656 650 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;