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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA975724" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 31 ✖

tax_clade 1

bioproject 1

  • PRJNA975724 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
945647 945647 PRJNA975724_S_NODE_2181_length_647_cov_6.168990_g2011_i0 PRJNA975724 2181 647 6.16899 39.9133653 root 1 Root_unresolved Root_unresolved 226 7.2099999999999995e-68   NR MBX7076496.1 2099680 g2011 i0 60.3 6.12982998454405 199 79 92.3 0 2 598 292 490 MBX7076496.1 F0F1 ATP synthase subunit alpha [Methanobacteriaceae archaeon] diamond 3966 226 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
946306 946306 PRJNA975724_S_NODE_4701_length_530_cov_1.700219_g4522_i0 PRJNA975724 4701 530 1.700219 9.0111607 archaeon 1906665 Archaea Archaea 114 1.39e-29   NR RYG69374.1 1906665 g4522 i0 64.4 0.413207547169811 73 26 41.3 0 520 302 12 84 RYG69374.1 MAG: hypothetical protein EON64_02905, partial [archaeon] diamond 219 114 1 Archaea               archaeon
6049113 6049113 PRJNA975724_S_NODE_33085_length_338_cov_2.883019_g32904_i0 PRJNA975724 33085 338 2.883019 9.74460422 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 144 2.68e-41   NR HJN55548.1 2163009 g32904 i0 71.7 1.64201183431953 92 26 81.7 0 338 63 94 185 HJN55548.1 peptidylprolyl isomerase [Candidatus Poseidoniales archaeon] diamond 555 144 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
14973624 14973624 PRJNA975724_S_NODE_25292_length_364_cov_4.360825_g25111_i0 PRJNA975724 25292 364 4.360825 15.873403 archaeon 1906665 Archaea Archaea 201 8.52e-64   NR MDP2439242.1 1906665 g25111 i0 88.9 1.77197802197802 108 12 89 0 364 41 68 175 MDP2439242.1 ADP-ribosylation factor-like protein [archaeon] diamond 645 201 1 Archaea               archaeon
23898205 23898205 PRJNA975724_S_NODE_25979_length_362_cov_1.740484_g25798_i0 PRJNA975724 25979 362 1.740484 6.30055208 archaeon 1906665 Archaea Archaea 117 1.9099999999999997e-30   NR MDP2435966.1 1906665 g25798 i0 73.6 1.12707182320442 72 19 59.7 0 362 147 113 184 MDP2435966.1 nucleoside-diphosphate kinase [archaeon] diamond 408 117 1 Archaea               archaeon
27025979 27025979 PRJNA975724_S_NODE_42122_length_315_cov_0.954545_g41941_i0 PRJNA975724 42122 315 0.954545 3.00681675 archaeon 1906665 Archaea Archaea 68.2 5.01e-11   NR RYG52199.1 1906665 g41941 i0 45.9 0.704761904761905 74 37 67.6 1 4 216 169 242 RYG52199.1 MAG: hypothetical protein EON66_09985 [archaeon] diamond 222 68.2 1 Archaea               archaeon
27025988 27025988 PRJNA975724_S_NODE_93462_length_230_cov_2.452229_g93281_i0 PRJNA975724 93462 230 2.452229 5.6401267 archaeon 1906665 Archaea Archaea 73.6 4.8e-14   NR MDP2438473.1 1906665 g93281 i0 61.3 0.808695652173913 62 21 80.9 1 4 189 129 187 MDP2438473.1 GTP-binding protein [archaeon] diamond 186 73.6 1 Archaea               archaeon
27278956 27278956 PRJNA975724_S_NODE_19203_length_390_cov_2.835962_g19022_i0 PRJNA975724 19203 390 2.835962 11.0602518 Thermococci archaeon 2250254 Archaea Archaea 68.9 1.66e-11   NR NPA48192.1 2250254 g19022 i0 47.5 0.469230769230769 61 32 46.9 0 2 184 119 179 NPA48192.1 nicotinamidase [Thermococci archaeon] diamond 183 68.9 1 Archaea   Methanobacteriati Methanobacteriota Thermococci       Thermococci archaeon
27531542 27531542 PRJNA975724_S_NODE_53483_length_290_cov_3.087558_g53302_i0 PRJNA975724 53483 290 3.087558 8.9539182 archaeon 1906665 Archaea Archaea 62.4 5.17e-9   NR MDP2436389.1 1906665 g53302 i0 43.5 0.713793103448276 69 33 65.2 3 285 97 207 275 MDP2436389.1 pectin acetylesterase-family hydrolase [archaeon] diamond 207 62.4 1 Archaea               archaeon
27594847 27594847 PRJNA975724_S_NODE_944_length_819_cov_17.556300_g807_i0 PRJNA975724 944 819 17.5563 143.786097 Candidatus Heimdallarchaeota archaeon LC_2 1841597 Archaea Archaea 72.4 1.94e-10   NR OLS27631.1 1841597 g807 i0 31.7 0.600732600732601 164 95 56.4 5 803 342 176 332 OLS27631.1 MAG: hypothetical protein HeimC2_10780 [Candidatus Heimdallarchaeota archaeon LC_2] diamond 492 72.4 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon LC_2
27626456 27626456 PRJNA975724_S_NODE_40404_length_319_cov_0.894309_g40223_i0 PRJNA975724 40404 319 0.894309 2.85284571 Nitrosarchaeum sp. 2026886 Archaea Archaea 63.9 2.96e-9   NR MBI2127885.1 2026886 g40223 i0 34.9 1.99373040752351 106 65 97.8 2 317 6 143 246 MBI2127885.1 tandem-95 repeat protein [Nitrosarchaeum sp.] diamond 636 63.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
27658062 27658062 PRJNA975724_S_NODE_14644_length_415_cov_2.850877_g14463_i0 PRJNA975724 14644 415 2.850877 11.83113955 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 46.6 0.0102   NR MFQ5474235.1 2910166 g14463 i0 39.1 0.498795180722892 69 41 49.9 1 2 208 582 649 MFQ5474235.1 methionine--tRNA ligase [Candidatus Nanoarchaeia archaeon] diamond 207 46.6 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
28163158 28163158 PRJNA975724_S_NODE_35105_length_332_cov_3.138996_g34924_i0 PRJNA975724 35105 332 3.138996 10.42146672 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 65.1 1.28e-10   NR MCD6240774.1 2026714 g34924 i0 48.6 1.31024096385542 72 31 65.1 1 1 216 73 138 MCD6240774.1 ribosomal protein S18-alanine N-acetyltransferase [Candidatus Bathyarchaeota archaeon] diamond 435 65.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
28194409 28194409 PRJNA975724_S_NODE_22346_length_376_cov_1.471947_g22165_i0 PRJNA975724 22346 376 1.471947 5.53452072 archaeon 1906665 Archaea Archaea 97.4 1.99e-23   NR RYG97703.1 1906665 g22165 i0 58.5 1.30851063829787 82 34 65.4 0 339 94 25 106 RYG97703.1 MAG: hypothetical protein EON65_52465 [archaeon] diamond 492 97.4 1 Archaea               archaeon
28200644 28200644 PRJNA975724_S_NODE_42226_length_314_cov_2.755187_g42045_i0 PRJNA975724 42226 314 2.755187 8.65128718 Archaea 2157 Archaea Archaea 55.1 3.85e-6   NR MCK5253134.1 1906666 g42045 i0 54.9 1.43312101910828 51 19 47.8 2 5 154 445 492 MCK5253134.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Thermoplasmata archaeon] diamond 450 55.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28668377 28668377 PRJNA975724_S_NODE_70027_length_262_cov_2.444444_g69846_i0 PRJNA975724 70027 262 2.444444 6.40444328 archaeon 1906665 Archaea Archaea 85.5 8.88e-19   NR MDP2438463.1 1906665 g69846 i0 90.9 0.50381679389313 44 4 50.4 0 261 130 115 158 MDP2438463.1 MC/SLC25 family protein [archaeon] diamond 132 85.5 1 Archaea               archaeon
28769111 28769111 PRJNA975724_S_NODE_35147_length_332_cov_2.420849_g34966_i0 PRJNA975724 35147 332 2.420849 8.03721868 Archaea 2157 Archaea Archaea 69.7 2.73e-11   NR GIQ98002.1 2163009 g34966 i0 39.8 4.50903614457831 83 48 75 1 6 254 266 346 GIQ98002.1 MAG: diacylglycerol kinase [Candidatus Poseidoniales archaeon] diamond 1497 69.7 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
29236673 29236673 PRJNA975724_S_NODE_34789_length_333_cov_2.369231_g34608_i0 PRJNA975724 34789 333 2.369231 7.88953923 Nitrosopumilus sp. 2024843 Archaea Archaea 43.9 0.0397   NR MDH5569133.1 2024843 g34608 i0 25 0.972972972972973 108 72 91.9 2 4 309 254 358 MDH5569133.1 cysteine--tRNA ligase [Nitrosopumilus sp.] diamond 324 43.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
29331264 29331264 PRJNA975724_S_NODE_51769_length_294_cov_1.045249_g51588_i0 PRJNA975724 51769 294 1.045249 3.07303206 archaeon 1906665 Archaea Archaea 45.1 0.0108   NR RYH15231.1 1906665 g51588 i0 33 1.61224489795918 88 46 77.6 2 294 67 700 786 RYH15231.1 MAG: isopenicillin N synthase family oxygenase [archaeon] diamond 474 45.1 1 Archaea               archaeon
30057474 30057474 PRJNA975724_S_NODE_60751_length_277_cov_2.279412_g60570_i0 PRJNA975724 60751 277 2.279412 6.31397124 Nanobdellota archaeon 2026764 Archaea Archaea 47.8 4.76e-4   NR MCK4589575.1 2026764 g60570 i0 58.3 0.389891696750903 36 15 39 0 3 110 139 174 MCK4589575.1 adenine phosphoribosyltransferase [Nanoarchaeota archaeon] diamond 108 47.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
30279135 30279135 PRJNA975724_S_NODE_30312_length_347_cov_1.948905_g30131_i0 PRJNA975724 30312 347 1.948905 6.76270035 archaeon 1906665 Archaea Archaea 124 7.839999999999999e-34   NR RYG49898.1 1906665 g30131 i0 56.4 1.64265129682997 94 41 81.3 0 13 294 45 138 RYG49898.1 MAG: hypothetical protein EON67_06260 [archaeon] diamond 570 124 1 Archaea               archaeon
31194637 31194637 PRJNA975724_S_NODE_23455_length_371_cov_3.909396_g23274_i0 PRJNA975724 23455 371 3.909396 14.50385916 archaeon 1906665 Archaea Archaea 66.6 2.25e-10   NR RYH31155.1 1906665 g23274 i0 49.3 0.590296495956873 73 30 55 2 370 167 161 231 RYH31155.1 MAG: hypothetical protein EON65_03315 [archaeon] diamond 219 66.6 1 Archaea               archaeon
31675602 31675602 PRJNA975724_S_NODE_26097_length_361_cov_4.496528_g25916_i0 PRJNA975724 26097 361 4.496528 16.23246608 root 1 Root_unresolved Root_unresolved 114 4.2e-29   NR OGD48165.1 1797378 g25916 i0 52.8 3.59002770083102 108 51 89.8 0 3 326 72 179 OGD48165.1 MAG: NADPH-dependent FMN reductase [Candidatus Bathyarchaeota archaeon RBG_13_46_16b] diamond 1296 115 0.991304347826087 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon RBG_13_46_16b
31701114 31701114 PRJNA975724_S_NODE_32437_length_340_cov_2.382022_g32256_i0 PRJNA975724 32437 340 2.382022 8.0988748 archaeon 1906665 Archaea Archaea 66.2 8.72e-11   NR RYG51869.1 1906665 g32256 i0 56.9 0.45 51 22 45 0 339 187 120 170 RYG51869.1 MAG: hypothetical protein EON67_02470 [archaeon] diamond 153 66.2 1 Archaea               archaeon
31764345 31764345 PRJNA975724_S_NODE_37757_length_325_cov_2.956349_g37576_i0 PRJNA975724 37757 325 2.956349 9.60813425 archaeon 1906665 Archaea Archaea 73.6 1.42e-12   NR MDP2436331.1 1906665 g37576 i0 60 3.17538461538462 60 24 55.4 0 4 183 412 471 MDP2436331.1 aminopeptidase P family protein [archaeon] diamond 1032 73.6 1 Archaea               archaeon
31954064 31954064 PRJNA975724_S_NODE_33057_length_338_cov_3.354717_g32876_i0 PRJNA975724 33057 338 3.354717 11.33894346 archaeon 1906665 Archaea Archaea 57.4 1.32e-7   NR RYH31156.1 1906665 g32876 i0 37.2 0.692307692307692 78 48 69.2 1 257 24 20 96 RYH31156.1 MAG: hypothetical protein EON65_03320 [archaeon] diamond 234 57.4 1 Archaea               archaeon
31954067 31954067 PRJNA975724_S_NODE_58057_length_282_cov_1.473684_g57876_i0 PRJNA975724 58057 282 1.473684 4.15578888 archaeon 1906665 Archaea Archaea 58.9 3.41e-9   NR RYG48314.1 1906665 g57876 i0 41.9 0.659574468085106 62 31 66 1 188 3 1 57 RYG48314.1 MAG: hypothetical protein EON67_07715 [archaeon] diamond 186 58.9 1 Archaea               archaeon
32017412 32017412 PRJNA975724_S_NODE_1458_length_724_cov_14.678955_g1306_i0 PRJNA975724 1458 724 14.678955 106.2756342 Thermoplasmatota archaeon 2806419 Archaea Archaea 72.8 1.47e-10   NR MEC7255192.1 2806419 g1306 i0 32.7 0.948895027624309 110 73 45.6 1 1 330 878 986 MEC7255192.1 putative Ig domain-containing protein [Thermoplasmatota archaeon] diamond 687 72.8 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32175869 32175869 PRJNA975724_S_NODE_28618_length_352_cov_4.989247_g28437_i0 PRJNA975724 28618 352 4.989247 17.56214944 Thermoplasmata archaeon 1906666 Archaea Archaea 48.9 8.31e-4   NR MDO9537579.1 1906666 g28437 i0 53.2 0.400568181818182 47 22 40.1 0 352 212 376 422 MDO9537579.1 hydroxymethylglutaryl-CoA reductase, degradative [Thermoplasmata archaeon] diamond 141 48.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32428874 32428874 PRJNA975724_S_NODE_5099_length_520_cov_3.646532_g4920_i0 PRJNA975724 5099 520 3.646532 18.9619664 archaeon 1906665 Archaea Archaea 51.6 1.31e-4   NR RYG49969.1 1906665 g4920 i0 52.4 0.242307692307692 42 20 24.2 0 518 393 125 166 RYG49969.1 MAG: hypothetical protein EON67_06130 [archaeon] diamond 126 51.6 1 Archaea               archaeon
32649533 32649533 PRJNA975724_S_NODE_86200_length_245_cov_0.895349_g86019_i0 PRJNA975724 86200 245 0.895349 2.19360505 Promethearchaeum syntrophicum 2594042 Archaea Archaea 46.6 0.00165   NR WP_147664301.1 2594042 g86019 i0 38.9 1.9469387755102 54 33 66.1 0 214 53 274 327 WP_147664301.1 double zinc ribbon domain-containing protein [Promethearchaeum syntrophicum] diamond 477 46.6 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Promethearchaeum Promethearchaeum syntrophicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;