RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA975724" and tax_phylum = "Hofneiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Hofneiviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA975724 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28225927 28225927 PRJNA975724_S_NODE_54506_length_289_cov_0.675926_g54325_i0 PRJNA975724 54506 289 0.675926 1.95342614 Escherichia phage Copypasta 3096133 Viruses Viruses 60.5 6.54e-10   NR WPH57058.1 3096133 g54325 i0 63.5 0.934256055363322 52 19 54 0 94 249 1 52 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 270 60.5 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29078863 29078863 PRJNA975724_S_NODE_91788_length_241_cov_0.880952_g91607_i0 PRJNA975724 91788 241 0.880952 2.12309432 Escherichia phage Copypasta 3096133 Viruses Viruses 55.5 3.5e-8   NR WPH57058.1 3096133 g91607 i0 60 0.622406639004149 50 20 62.2 0 181 32 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 55.5 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31037375 31037375 PRJNA975724_S_NODE_22375_length_376_cov_0.963696_g22194_i0 PRJNA975724 22375 376 0.963696 3.62349696 Escherichia phage Copypasta 3096133 Viruses Viruses 78.2 1.86e-16   NR WPH57058.1 3096133 g22194 i0 71.2 0.414893617021277 52 15 41.5 0 181 336 1 52 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 156 78.2 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;