RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA975724" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA975724 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10195494 10195494 PRJNA975724_S_NODE_7728_length_475_cov_28.791045_g7547_i0 PRJNA975724 7728 475 28.791045 136.75746375 Eukaryota 2759 Fungi Fungi 162 2.55e-47   NR EPZ33870.1 988480 g7547 i0 66.7 4.60421052631579 123 41 77.7 0 1 369 70 192 EPZ33870.1 60S ribosomal protein L13a [Rozella allomycis CSF55] diamond 2187 162 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29211403 29211403 PRJNA975724_S_NODE_72249_length_259_cov_2.069892_g72068_i0 PRJNA975724 72249 259 2.069892 5.36102028 Eukaryota 2759 Fungi Fungi 64.3 1.05e-9   NR EPZ36465.1 988480 g72068 i0 65.8 1.41312741312741 38 13 44 0 146 259 157 194 EPZ36465.1 Zinc finger, GATA-type domain-containing protein [Rozella allomycis CSF55] diamond 366 64.7 0.993817619783617 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;