contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJNA975724" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4774271 | 4774271 | PRJNA975724_S_NODE_33964_length_336_cov_1.171103_g33783_i0 | PRJNA975724 | 33964 | 336 | 1.171103 | 3.93490608 | Waddliaceae bacterium | 2026802 | Bacteria | Bacteria | 75.5 | 2.39e-13 | NR | HEY4831209.1 | 2026802 | g33783 | i0 | 50.7 | 0.651785714285714 | 73 | 36 | 65.2 | 0 | 334 | 116 | 276 | 348 | HEY4831209.1 F0F1 ATP synthase subunit alpha [Waddliaceae bacterium] | diamond | 219 | 75.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddliaceae bacterium | ||
| 12425419 | 12425419 | PRJNA975724_S_NODE_44970_length_308_cov_1.310638_g44789_i0 | PRJNA975724 | 44970 | 308 | 1.310638 | 4.03676504 | Simkania sp. | 34094 | Bacteria | Bacteria | 184 | 9.79e-57 | NR | MBS3904017.1 | 34094 | g44789 | i0 | 88.2 | 2.98051948051948 | 102 | 12 | 99.4 | 0 | 307 | 2 | 75 | 176 | MBS3904017.1 ATP-dependent Clp protease proteolytic subunit [Simkania sp.] | diamond | 918 | 184 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 26899514 | 26899514 | PRJNA975724_S_NODE_56481_length_285_cov_1.292453_g56300_i0 | PRJNA975724 | 56481 | 285 | 1.292453 | 3.68349105 | Waddliaceae bacterium | 2026802 | Bacteria | Bacteria | 51.6 | 8.65e-6 | NR | HEY4832334.1 | 2026802 | g56300 | i0 | 61.8 | 0.357894736842105 | 34 | 13 | 35.8 | 0 | 9 | 110 | 90 | 123 | HEY4832334.1 uL14 family ribosomal protein [Waddliaceae bacterium] | diamond | 102 | 51.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddliaceae bacterium | ||
| 28042991 | 28042991 | PRJNA975724_S_NODE_86865_length_244_cov_1.801170_g86684_i0 | PRJNA975724 | 86865 | 244 | 1.80117 | 4.3948548 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 98.6 | 1.16e-23 | NR | WP_075883010.1 | 1785087 | g86684 | i0 | 94.1 | 3.13524590163934 | 51 | 3 | 62.7 | 0 | 91 | 243 | 131 | 181 | WP_075883010.1 elongation factor P [Candidatus Protochlamydia sp. W-9] | diamond | 765 | 98.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia sp. W-9 | |
| 28857559 | 28857559 | PRJNA975724_S_NODE_53868_length_290_cov_1.064516_g53687_i0 | PRJNA975724 | 53868 | 290 | 1.064516 | 3.0870964 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 82.8 | 3.79e-16 | NR | HSX04566.1 | 2047756 | g53687 | i0 | 44.9 | 2.89655172413793 | 89 | 49 | 92.1 | 0 | 286 | 20 | 52 | 140 | HSX04566.1 hypothetical protein [Rhabdochlamydiaceae bacterium] | diamond | 840 | 82.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 29646610 | 29646610 | PRJNA975724_S_NODE_71050_length_261_cov_1.398936_g70869_i0 | PRJNA975724 | 71050 | 261 | 1.398936 | 3.65122296 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 97.8 | 1.8e-21 | NR | MBA3721270.1 | 2052176 | g70869 | i0 | 96 | 1.14942528735632 | 50 | 2 | 57.5 | 0 | 152 | 3 | 1 | 50 | MBA3721270.1 chaperonin GroEL [Parachlamydiaceae bacterium] | diamond | 300 | 97.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 29868096 | 29868096 | PRJNA975724_S_NODE_27091_length_358_cov_1.270175_g26910_i0 | PRJNA975724 | 27091 | 358 | 1.270175 | 4.5472265 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 48.9 | 8.81e-4 | NR | MEC7840285.1 | 2081524 | g26910 | i0 | 30.7 | 0.737430167597765 | 88 | 60 | 72.9 | 1 | 357 | 97 | 336 | 423 | MEC7840285.1 hypothetical protein [Chlamydiota bacterium] | diamond | 264 | 48.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 29868110 | 29868110 | PRJNA975724_S_NODE_94311_length_218_cov_4.475862_g94130_i0 | PRJNA975724 | 94311 | 218 | 4.475862 | 9.75737916 | Chlamydiia bacterium | 2052156 | Bacteria | Bacteria | 63.5 | 1.23e-9 | NR | MCH9631148.1 | 2052156 | g94130 | i0 | 42.4 | 2.6697247706422 | 66 | 36 | 88.1 | 1 | 217 | 26 | 531 | 596 | MCH9631148.1 Phosphoenolpyruvate carboxykinase [GTP] [Chlamydiia bacterium] | diamond | 582 | 63.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiia bacterium | ||||
| 31517700 | 31517700 | PRJNA975724_S_NODE_58576_length_281_cov_1.634615_g58395_i0 | PRJNA975724 | 58576 | 281 | 1.634615 | 4.59326815 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 113 | 1.04e-26 | NR | WP_059060001.1 | 389348 | g58395 | i0 | 56.3 | 3.02135231316726 | 96 | 39 | 99.3 | 1 | 280 | 2 | 760 | 855 | WP_059060001.1 efflux RND transporter permease subunit [Candidatus Protochlamydia naegleriophila] | diamond | 849 | 113 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 31764352 | 31764352 | PRJNA975724_S_NODE_84737_length_246_cov_1.034682_g84556_i0 | PRJNA975724 | 84737 | 246 | 1.034682 | 2.54531772 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 134 | 1.21e-34 | NR | MBA3721406.1 | 2052176 | g84556 | i0 | 73.2 | 2 | 82 | 22 | 100 | 0 | 246 | 1 | 458 | 539 | MBA3721406.1 DUF11 domain-containing protein [Parachlamydiaceae bacterium] | diamond | 492 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 32049075 | 32049075 | PRJNA975724_S_NODE_84598_length_246_cov_1.329480_g84417_i0 | PRJNA975724 | 84598 | 246 | 1.32948 | 3.2705208 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 74.7 | 7.77e-14 | NR | MBA3815700.1 | 2052176 | g84417 | i0 | 49.2 | 0.768292682926829 | 63 | 32 | 76.8 | 0 | 193 | 5 | 20 | 82 | MBA3815700.1 F0F1 ATP synthase subunit A [Parachlamydiaceae bacterium] | diamond | 189 | 74.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 32397289 | 32397289 | PRJNA975724_S_NODE_56839_length_284_cov_1.824645_g56658_i0 | PRJNA975724 | 56839 | 284 | 1.824645 | 5.1819918 | Candidatus Protochlamydia sp. | 2687294 | Bacteria | Bacteria | 52.8 | 2.24e-6 | NR | MBA2369527.1 | 2687294 | g56658 | i0 | 40.9 | 0.697183098591549 | 66 | 35 | 69.7 | 1 | 56 | 253 | 1 | 62 | MBA2369527.1 YtxH domain-containing protein [Candidatus Protochlamydia sp.] | diamond | 198 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;