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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA975724" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 4 ✖

bioproject 1

  • PRJNA975724 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27626456 27626456 PRJNA975724_S_NODE_40404_length_319_cov_0.894309_g40223_i0 PRJNA975724 40404 319 0.894309 2.85284571 Nitrosarchaeum sp. 2026886 Archaea Archaea 63.9 2.96e-9   NR MBI2127885.1 2026886 g40223 i0 34.9 1.99373040752351 106 65 97.8 2 317 6 143 246 MBI2127885.1 tandem-95 repeat protein [Nitrosarchaeum sp.] diamond 636 63.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
28163158 28163158 PRJNA975724_S_NODE_35105_length_332_cov_3.138996_g34924_i0 PRJNA975724 35105 332 3.138996 10.42146672 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 65.1 1.28e-10   NR MCD6240774.1 2026714 g34924 i0 48.6 1.31024096385542 72 31 65.1 1 1 216 73 138 MCD6240774.1 ribosomal protein S18-alanine N-acetyltransferase [Candidatus Bathyarchaeota archaeon] diamond 435 65.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
29236673 29236673 PRJNA975724_S_NODE_34789_length_333_cov_2.369231_g34608_i0 PRJNA975724 34789 333 2.369231 7.88953923 Nitrosopumilus sp. 2024843 Archaea Archaea 43.9 0.0397   NR MDH5569133.1 2024843 g34608 i0 25 0.972972972972973 108 72 91.9 2 4 309 254 358 MDH5569133.1 cysteine--tRNA ligase [Nitrosopumilus sp.] diamond 324 43.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31675602 31675602 PRJNA975724_S_NODE_26097_length_361_cov_4.496528_g25916_i0 PRJNA975724 26097 361 4.496528 16.23246608 root 1 Root_unresolved Root_unresolved 114 4.2e-29   NR OGD48165.1 1797378 g25916 i0 52.8 3.59002770083102 108 51 89.8 0 3 326 72 179 OGD48165.1 MAG: NADPH-dependent FMN reductase [Candidatus Bathyarchaeota archaeon RBG_13_46_16b] diamond 1296 115 0.991304347826087 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon RBG_13_46_16b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;