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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA971676" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 35 ✖

tax_kingdom 1

bioproject 1

  • PRJNA971676 · 35 ✖

analysis 1

  • diamond · 35 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11148203 11148203 PRJNA971676_P_NODE_16889_length_248_cov_0.880000_g16800_i0 PRJNA971676 16889 248 0.88 2.1824 Myxococcaceae bacterium 2484252 Bacteria Bacteria 124 7.019999999999998e-32   NR RYZ13579.1 2484252 g16800 i0 88.2 0.82258064516129 68 8 82.3 0 206 3 300 367 RYZ13579.1 MAG: ABC-F family ATP-binding cassette domain-containing protein, partial [Myxococcaceae bacterium] diamond 204 124 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
25170970 25170970 PRJNA971676_P_NODE_8540_length_305_cov_0.806034_g8451_i0 PRJNA971676 8540 305 0.806034 2.4584037 Pseudomonadati 3379134 Bacteria Bacteria 195 7.2e-60   NR MDL1985581.1 2026735 g8451 i0 97 3.97377049180328 101 3 99.3 0 303 1 105 205 MDL1985581.1 elongation factor Tu [Deltaproteobacteria bacterium] diamond 1212 195 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26709088 26709088 PRJNA971676_P_NODE_16041_length_249_cov_0.875000_g15952_i0 PRJNA971676 16041 249 0.875 2.17875 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 158 4.12e-44   NR RLB03588.1 2026735 g15952 i0 95.1 1.97590361445783 82 4 98.8 0 248 3 265 346 RLB03588.1 MAG: hypothetical protein DRG59_11530, partial [Deltaproteobacteria bacterium] diamond 492 158 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27151964 27151964 PRJNA971676_P_NODE_21042_length_243_cov_1.782353_g20953_i0 PRJNA971676 21042 243 1.782353 4.33111779 Myxococcota bacterium 2818507 Bacteria Bacteria 63.5 1.7e-9   NR MEZ4269039.1 2818507 g20953 i0 55 0.987654320987654 80 36 98.8 0 240 1 275 354 MEZ4269039.1 hypothetical protein [Myxococcota bacterium] diamond 240 63.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27278932 27278932 PRJNA971676_P_NODE_4423_length_387_cov_1.226115_g4334_i0 PRJNA971676 4423 387 1.226115 4.74506505 Myxococcota bacterium 2818507 Bacteria Bacteria 64.3 4.73e-9   NR MEZ4269039.1 2818507 g4334 i0 50 0.75968992248062 98 47 76 2 376 83 288 383 MEZ4269039.1 hypothetical protein [Myxococcota bacterium] diamond 294 64.3 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27405417 27405417 PRJNA971676_P_NODE_17643_length_247_cov_0.885057_g17554_i0 PRJNA971676 17643 247 0.885057 2.18609079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 108 3.76e-25   NR MBW1796345.1 2026735 g17554 i0 73.2 0.862348178137652 71 19 86.2 0 35 247 634 704 MBW1796345.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 213 108 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27562853 27562853 PRJNA971676_P_NODE_22084_length_242_cov_0.911243_g21995_i0 PRJNA971676 22084 242 0.911243 2.20520806 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 150 2.09e-41   NR MBW2570564.1 2026735 g21995 i0 97.5 0.991735537190083 80 2 99.2 0 2 241 168 247 MBW2570564.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 240 150 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27594808 27594808 PRJNA971676_P_NODE_18544_length_246_cov_0.890173_g18455_i0 PRJNA971676 18544 246 0.890173 2.18982558 Myxococcota bacterium 2818507 Bacteria Bacteria 52 2.07e-5   NR MEL6177379.1 2818507 g18455 i0 48.2 1.5609756097561 56 28 67.1 1 80 244 295 350 MEL6177379.1 DUF4419 domain-containing protein [Myxococcota bacterium] diamond 384 52 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28068263 28068263 PRJNA971676_P_NODE_12985_length_258_cov_1.389189_g12896_i0 PRJNA971676 12985 258 1.389189 3.58410762 Myxococcales bacterium 2026763 Bacteria Bacteria 43.9 0.00487   NR MCA9640749.1 2026763 g12896 i0 87.5 1.18604651162791 24 3 27.9 0 258 187 89 112 MCA9640749.1 hypothetical protein [Myxococcales bacterium] diamond 306 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28068265 28068265 PRJNA971676_P_NODE_14745_length_250_cov_0.870056_g14656_i0 PRJNA971676 14745 250 0.870056 2.17514 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 40.4 0.0288   NR MBW2345058.1 2026735 g14656 i0 56.3 0.384 32 14 38.4 0 151 56 5 36 MBW2345058.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 96 40.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28068269 28068269 PRJNA971676_P_NODE_19425_length_245_cov_0.895349_g19336_i0 PRJNA971676 19425 245 0.895349 2.19360505 Polyangiaceae bacterium 2268199 Bacteria Bacteria 42.4 0.0487   NR MFO0639380.1 2268199 g19336 i0 45.9 0.906122448979592 74 30 83.3 3 2 205 199 268 MFO0639380.1 hypothetical protein [Polyangiaceae bacterium] diamond 222 42.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28636841 28636841 PRJNA971676_P_NODE_10687_length_280_cov_1.111111_g10598_i0 PRJNA971676 10687 280 1.111111 3.1111108 Kofleriaceae bacterium 2212474 Bacteria Bacteria 66.6 9.33e-11   NR HTE54918.1 2212474 g10598 i0 46.2 1.81071428571429 93 45 96.4 4 275 6 132 222 HTE54918.1 hypothetical protein [Kofleriaceae bacterium] diamond 507 66.6 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29678244 29678244 PRJNA971676_P_NODE_19530_length_245_cov_0.895349_g19441_i0 PRJNA971676 19530 245 0.895349 2.19360505 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 161 6.26e-46   NR RLB16734.1 2026735 g19441 i0 91.4 0.991836734693878 81 7 99.2 0 3 245 275 355 RLB16734.1 MAG: ABC transporter substrate-binding protein [Deltaproteobacteria bacterium] diamond 243 161 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29773144 29773144 PRJNA971676_P_NODE_7091_length_326_cov_1.826087_g7002_i0 PRJNA971676 7091 326 1.826087 5.95304362 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 47.4 0.00223   NR MBD89634.1 2026735 g7002 i0 33.7 0.901840490797546 98 59 89.3 4 307 17 276 368 MBD89634.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 294 47.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29874352 29874352 PRJNA971676_P_NODE_21691_length_243_cov_0.905882_g21602_i0 PRJNA971676 21691 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 87.4 2.67e-20   NR MBW1696592.1 2026735 g21602 i0 73.2 4.14814814814815 56 15 69.1 0 170 3 1 56 MBW1696592.1 IscA/HesB family protein [Deltaproteobacteria bacterium] diamond 1008 88.2 0.99092970521542 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30026138 30026138 PRJNA971676_P_NODE_17511_length_247_cov_0.885057_g17422_i0 PRJNA971676 17511 247 0.885057 2.18609079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 122 3.5500000000000004e-33   NR MDL1963627.1 2026735 g17422 i0 80.6 1.62753036437247 67 13 81.4 0 202 2 1 67 MDL1963627.1 Uma2 family endonuclease [Deltaproteobacteria bacterium] diamond 402 122 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30499951 30499951 PRJNA971676_P_NODE_13973_length_251_cov_0.865169_g13884_i0 PRJNA971676 13973 251 0.865169 2.17157419 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 162 3.69e-44   NR MBW2738333.1 2026735 g13884 i0 96.4 0.99203187250996006 83 3 99.2 0 249 1 795 877 MBW2738333.1 SIR2 family protein [Deltaproteobacteria bacterium] diamond 249 162 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30562787 30562787 PRJNA971676_P_NODE_15013_length_250_cov_0.870056_g14924_i0 PRJNA971676 15013 250 0.870056 2.17514 Myxococcota bacterium 2818507 Bacteria Bacteria 99 5.88e-22   NR MEM6788022.1 2818507 g14924 i0 55.1 2.88 78 35 93.6 0 237 4 379 456 MEM6788022.1 leucyl aminopeptidase family protein [Myxococcota bacterium] diamond 720 99 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30917103 30917103 PRJNA971676_P_NODE_10014_length_286_cov_1.436620_g9925_i0 PRJNA971676 10014 286 1.43662 4.1087332 Corallococcus 83461 Bacteria Bacteria 84.7 3.72e-17   NR WP_120536502.1 2316729 g9925 i0 46.8 4.84615384615385 77 40 80.8 1 231 1 138 213 WP_120536502.1 acyl-CoA dehydrogenase family protein [Corallococcus sp. CA047B] diamond 1386 85.1 0.995299647473561 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus sp. CA047B
31005443 31005443 PRJNA971676_P_NODE_13794_length_251_cov_0.865169_g13705_i0 PRJNA971676 13794 251 0.865169 2.17157419 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 166 2.05e-49   NR MBW1903223.1 2026735 g13705 i0 97.6 0.99203187250996006 83 2 99.2 0 250 2 157 239 MBW1903223.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 249 166 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31043628 31043628 PRJNA971676_P_NODE_18335_length_246_cov_0.890173_g18246_i0 PRJNA971676 18335 246 0.890173 2.18982558 Pseudomonadati 3379134 Bacteria Bacteria 148 1.06e-41   NR MBW1746760.1 2026735 g18246 i0 87.8 4.98780487804878 82 10 100 0 1 246 188 269 MBW1746760.1 lipopolysaccharide heptosyltransferase II [Deltaproteobacteria bacterium] diamond 1227 148 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31131540 31131540 PRJNA971676_P_NODE_8795_length_301_cov_1.013158_g8706_i0 PRJNA971676 8795 301 1.013158 3.04960558 Polyangiaceae bacterium 2268199 Bacteria Bacteria 85.5 6.22e-17   NR HTV24288.1 2268199 g8706 i0 43 1.13621262458472 114 46 96.7 5 296 6 180 291 HTV24288.1 hypothetical protein [Polyangiaceae bacterium] diamond 342 85.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31384911 31384911 PRJNA971676_P_NODE_14776_length_250_cov_0.870056_g14687_i0 PRJNA971676 14776 250 0.870056 2.17514 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 166 1.6399999999999998e-48   NR MBW1690146.1 2026735 g14687 i0 91.5 1.968 82 7 98.4 0 4 249 86 167 MBW1690146.1 L-threonine 3-dehydrogenase [Deltaproteobacteria bacterium] diamond 492 166 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31448063 31448063 PRJNA971676_P_NODE_15996_length_249_cov_0.875000_g15907_i0 PRJNA971676 15996 249 0.875 2.17875 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 144 1.45e-38   NR MBW2004832.1 2026735 g15907 i0 86.6 0.987951807228916 82 11 98.8 0 248 3 210 291 MBW2004832.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 246 144 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31606220 31606220 PRJNA971676_P_NODE_19356_length_245_cov_0.895349_g19267_i0 PRJNA971676 19356 245 0.895349 2.19360505 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 142 3.5199999999999997e-37   NR NOR04703.1 2026735 g19267 i0 85.2 2.97551020408163 81 12 99.2 0 3 245 522 602 NOR04703.1 pyruvate, phosphate dikinase [Deltaproteobacteria bacterium] diamond 729 142 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31764321 31764321 PRJNA971676_P_NODE_14817_length_250_cov_0.870056_g14728_i0 PRJNA971676 14817 250 0.870056 2.17514 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 134 1.9199999999999999e-34   NR MBW2708084.1 2026735 g14728 i0 87.7 0.972 81 9 97.2 1 8 250 1 80 MBW2708084.1 ABC transporter ATP-binding protein [Deltaproteobacteria bacterium] diamond 243 134 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31764322 31764322 PRJNA971676_P_NODE_16117_length_249_cov_0.875000_g16028_i0 PRJNA971676 16117 249 0.875 2.17875 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 159 4.05e-43   NR NQT31447.1 2026735 g16028 i0 90.4 1 83 8 100 0 249 1 62 144 NQT31447.1 formate dehydrogenase subunit alpha [Deltaproteobacteria bacterium] diamond 249 159 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31859077 31859077 PRJNA971676_P_NODE_15097_length_250_cov_0.870056_g15008_i0 PRJNA971676 15097 250 0.870056 2.17514 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 161 5.569999999999999e-48   NR MCK4425885.1 2026735 g15008 i0 95.1 0.984 82 4 98.4 0 248 3 29 110 MCK4425885.1 metallophosphoesterase [Deltaproteobacteria bacterium] diamond 246 161 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31859079 31859079 PRJNA971676_P_NODE_23557_length_241_cov_0.916667_g23468_i0 PRJNA971676 23557 241 0.916667 2.20916747 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 90.5 5.65e-19   NR MBN1907394.1 2026735 g23468 i0 56.6 0.946058091286307 76 33 94.6 0 1 228 407 482 MBN1907394.1 TonB-dependent receptor [Deltaproteobacteria bacterium] diamond 228 90.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32112414 32112414 PRJNA971676_P_NODE_21758_length_243_cov_0.905882_g21669_i0 PRJNA971676 21758 243 0.905882 2.20129326 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 154 4.5e-42   NR MBW1675644.1 2026735 g21669 i0 93.8 1 81 5 100 0 1 243 333 413 MBW1675644.1 M48 family metalloprotease [Deltaproteobacteria bacterium] diamond 243 154 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32207308 32207308 PRJNA971676_P_NODE_438_length_1027_cov_1.503145_g373_i0 PRJNA971676 438 1027 1.503145 15.43729915 Polyangia bacterium 3058050 Bacteria Bacteria 105 7.7e-21   NR HEY3358554.1 3058050 g373 i0 28.6 1.04284323271665 357 221 97.9 10 23 1027 1702 2046 HEY3358554.1 choice-of-anchor D domain-containing protein [Polyangia bacterium] diamond 1071 105 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
32397259 32397259 PRJNA971676_P_NODE_739_length_827_cov_1.824934_g664_i0 PRJNA971676 739 827 1.824934 15.09220418 Myxococcaceae bacterium 2484252 Bacteria Bacteria 50.1 0.00754   NR HLM44838.1 2484252 g664 i0 30.9 0.399032648125756 110 70 38.8 3 506 826 203 309 HLM44838.1 PKD domain-containing protein [Myxococcaceae bacterium] diamond 330 50.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
32460528 32460528 PRJNA971676_P_NODE_14299_length_251_cov_0.865169_g14210_i0 PRJNA971676 14299 251 0.865169 2.17157419 Myxococcales bacterium 2026763 Bacteria Bacteria 70.9 3.83e-12   NR MDB4968223.1 2026763 g14210 i0 47.1 0.812749003984064 68 36 81.3 0 251 48 270 337 MDB4968223.1 smt1 [Myxococcales bacterium] diamond 204 70.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32624459 32624459 PRJNA971676_P_NODE_21560_length_243_cov_0.905882_g21471_i0 PRJNA971676 21560 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 74.7 1.91e-13   NR MBW2662222.1 2026735 g21471 i0 88.1 1.53086419753086 42 5 51.9 0 117 242 1 42 MBW2662222.1 B12-binding domain-containing radical SAM protein [Deltaproteobacteria bacterium] diamond 372 75.1 0.994673768308922 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32807236 32807236 PRJNA971676_P_NODE_13920_length_251_cov_0.865169_g13831_i0 PRJNA971676 13920 251 0.865169 2.17157419 Myxococcales bacterium 2026763 Bacteria Bacteria 124 6.16e-31   NR MBL8602489.1 2026763 g13831 i0 64.6 0.9800796812749 82 29 98 0 250 5 96 177 MBL8602489.1 hypothetical protein [Myxococcales bacterium] diamond 246 124 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;