RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA971676" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA971676 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29804799 29804799 PRJNA971676_P_NODE_21871_length_243_cov_0.876471_g21782_i0 PRJNA971676 21871 243 0.876471 2.12982453 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 158 1.0600000000000001e-44   NR MCK5118620.1 2053570 g21782 i0 96.2 2.92592592592593 79 3 97.5 0 239 3 283 361 MCK5118620.1 Gfo/Idh/MocA family oxidoreductase [Candidatus Latescibacterota bacterium] diamond 711 158 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
30878989 30878989 PRJNA971676_P_NODE_21774_length_243_cov_0.905882_g21685_i0 PRJNA971676 21774 243 0.905882 2.20129326 Candidatus Latescibacteria bacterium 4484_7 1970771 Bacteria Bacteria 92.8 5.04e-20   NR OQX85092.1 1970771 g21685 i0 57.7 1.72839506172839 78 32 95.1 1 9 239 204 281 OQX85092.1 MAG: hypothetical protein B6D63_03050 [Candidatus Latescibacteria bacterium 4484_7] diamond 420 92.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacteria bacterium 4484_7
31669397 31669397 PRJNA971676_P_NODE_17717_length_247_cov_0.885057_g17628_i0 PRJNA971676 17717 247 0.885057 2.18609079 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 145 5.57e-41   NR MFC1694479.1 2053570 g17628 i0 85.4 0.995951417004049 82 12 99.6 0 1 246 213 294 MFC1694479.1 ABC transporter permease [Candidatus Latescibacterota bacterium] diamond 246 145 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;