RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA971593" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA971593 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8597199 8597199 PRJNA971593_P_NODE_20567_length_261_cov_1.223404_g20418_i0 PRJNA971593 20567 261 1.223404 3.19308444 Narcissus common latent virus 160844 Viruses Viruses 179 4.95e-50   NR YP_699983.1 160844 g20418 i0 96.5 0.988505747126437 86 3 98.9 0 3 260 1858 1943 YP_699983.1 RNA-dependent RNA polymerase [Narcissus common latent virus] diamond 258 179 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensnarcissi
28889121 28889121 PRJNA971593_P_NODE_3208_length_672_cov_1.308848_g3065_i0 PRJNA971593 3208 672 1.308848 8.79545856 Narcissus common latent virus 160844 Viruses Viruses 396 3.95e-138   NR YP_699984.1 160844 g3065 i0 85.1 0.991071428571429 222 33 99.1 0 670 5 6 227 YP_699984.1 Triple Gene Block protein 1 [Narcissus common latent virus] diamond 666 396 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensnarcissi
32681020 32681020 PRJNA971593_P_NODE_20640_length_260_cov_1.379679_g20491_i0 PRJNA971593 20640 260 1.379679 3.5871654 Narcissus common latent virus 160844 Viruses Viruses 171 4.569999999999999e-47   NR YP_699983.1 160844 g20491 i0 96.5 0.992307692307692 86 3 99.2 0 260 3 1528 1613 YP_699983.1 RNA-dependent RNA polymerase [Narcissus common latent virus] diamond 258 171 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensnarcissi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;