RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA971593" and tax_phylum = "Cryptomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA971593 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1266246 1266246 PRJNA971593_P_NODE_5421_length_523_cov_1.026667_g5274_i0 PRJNA971593 5421 523 1.026667 5.36946841 Rozella allomycis CSF55 988480 Fungi Fungi 241 9.08e-71   NR EPZ32895.1 988480 g5274 i0 67.6 1.98470363288719 173 56 99.2 0 4 522 597 769 EPZ32895.1 HAD-like domain-containing protein [Rozella allomycis CSF55] diamond 1038 241 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
6047336 6047336 PRJNA971593_P_NODE_15045_length_309_cov_1.788136_g14896_i0 PRJNA971593 15045 309 1.788136 5.52534024 Rozella allomycis CSF55 988480 Fungi Fungi 87.8 1.18e-17   NR RKP17122.1 988480 g14896 i0 52 1.90291262135922 98 40 94.2 4 6 296 346 437 RKP17122.1 hypothetical protein ROZALSC1DRAFT_16731, partial [Rozella allomycis CSF55] diamond 588 87.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27626422 27626422 PRJNA971593_P_NODE_9304_length_398_cov_0.947692_g9155_i0 PRJNA971593 9304 398 0.947692 3.77181416 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 187 4.91e-52   NR PJF19231.1 1246581 g9155 i0 65.9 0.972361809045226 129 42 97.2 1 389 3 600 726 PJF19231.1 Aminoacyl-tRNA synthetase, class Ia domain-containing protein [Paramicrosporidium saccamoebae] diamond 387 187 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
29022127 29022127 PRJNA971593_P_NODE_14908_length_311_cov_0.970588_g14759_i0 PRJNA971593 14908 311 0.970588 3.01852868 Fungi 4751 Fungi Fungi 81.3 2.43e-15   NR RKP17122.1 988480 g14759 i0 47.5 3.48231511254019 99 46 94.5 4 296 3 365 458 RKP17122.1 hypothetical protein ROZALSC1DRAFT_16731, partial [Rozella allomycis CSF55] diamond 1083 81.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30853687 30853687 PRJNA971593_P_NODE_6534_length_476_cov_1.344913_g6386_i0 PRJNA971593 6534 476 1.344913 6.40178588 Eukaryota 2759 Fungi Fungi 67.8 8.41e-10   NR EPZ32895.1 988480 g6386 i0 32.3 2.04201680672269 158 82 98.3 4 7 474 811 945 EPZ32895.1 HAD-like domain-containing protein [Rozella allomycis CSF55] diamond 972 67.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31890818 31890818 PRJNA971593_P_NODE_17557_length_285_cov_0.943396_g17408_i0 PRJNA971593 17557 285 0.943396 2.6886786 Rozella allomycis CSF55 988480 Fungi Fungi 111 3.26e-26   NR RKP17122.1 988480 g17408 i0 59.6 1.97894736842105 94 37 98.9 1 284 3 88 180 RKP17122.1 hypothetical protein ROZALSC1DRAFT_16731, partial [Rozella allomycis CSF55] diamond 564 111 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32397215 32397215 PRJNA971593_P_NODE_15839_length_300_cov_2.365639_g15690_i0 PRJNA971593 15839 300 2.365639 7.096917 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 93.2 1.42e-19   NR PJF19231.1 1246581 g15690 i0 49.5 0.97 97 43 97 1 293 3 1403 1493 PJF19231.1 Aminoacyl-tRNA synthetase, class Ia domain-containing protein [Paramicrosporidium saccamoebae] diamond 291 93.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;