RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA971593" and tax_phylum = "Candidatus Roizmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA971593 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10194924 10194924 PRJNA971593_P_NODE_19348_length_270_cov_2.725888_g19199_i0 PRJNA971593 19348 270 2.725888 7.3598976 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 104 1.41e-26   NR MFS8159965.1 2282149 g19199 i0 63.3 1.98888888888889 90 30 98.9 2 267 1 19 106 MFS8159965.1 DnaJ domain-containing protein [Candidatus Roizmanbacteria bacterium] diamond 537 104 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
31764301 31764301 PRJNA971593_P_NODE_23837_length_249_cov_0.875000_g23688_i0 PRJNA971593 23837 249 0.875 2.17875 Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_ 2282149 Bacteria Bacteria 63.2 2.54e-9   NR OGK20587.1 1802035 g23688 i0 41.5 0.987951807228916 82 38 98.8 2 248 3 353 424 OGK20587.1 MAG: hypothetical protein A3C23_05325 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_37_13b] diamond 246 63.2 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_37_13b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;