RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA966993" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA966993 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27247157 27247157 PRJNA966993_P_NODE_73783_length_264_cov_2.026178_g73331_i0 PRJNA966993 73783 264 2.026178 5.34910992 Caldisphaera sp. 2060322 Archaea Archaea 63.9 1.31e-9   NR MFP3144362.1 2060322 g73331 i0 41.1 1.02272727272727 90 43 97.7 3 258 1 186 269 MFP3144362.1 ABC transporter ATP-binding protein [Caldisphaera sp.] diamond 270 63.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Acidilobales Caldisphaeraceae Caldisphaera Caldisphaera sp.
32334034 32334034 PRJNA966993_P_NODE_62939_length_280_cov_2.202899_g62487_i0 PRJNA966993 62939 280 2.202899 6.1681172 Thermoproteota archaeon 2056631 Archaea Archaea 47.8 4.55e-4   NR MDQ2684781.1 2056631 g62487 i0 32.6 0.953571428571429 89 50 85.7 3 1 240 74 161 MDQ2684781.1 CHRD domain-containing protein [Thermoproteota archaeon] diamond 267 47.8 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;