RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA966993" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA966993 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28383921 28383921 PRJNA966993_P_NODE_67086_length_274_cov_2.069652_g66634_i0 PRJNA966993 67086 274 2.069652 5.67084648 Minisyncoccota bacterium 2053589 Bacteria Bacteria 80.9 2.15e-17   NR MDR3570671.1 2053589 g66634 i0 52.1 1.02919708029197 94 38 95.3 2 267 7 15 108 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 282 80.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29520575 29520575 PRJNA966993_P_NODE_70450_length_269_cov_2.352041_g69998_i0 PRJNA966993 70450 269 2.352041 6.32699029 Minisyncoccota bacterium 2053589 Bacteria Bacteria 54.3 4.16e-6   NR MDR3548732.1 2053589 g69998 i0 59 0.434944237918216 39 16 43.5 0 77 193 56 94 MDR3548732.1 50S ribosome-binding GTPase [Candidatus Paceibacterota bacterium] diamond 117 54.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30784193 30784193 PRJNA966993_P_NODE_77594_length_258_cov_1.664865_g77142_i0 PRJNA966993 77594 258 1.664865 4.2953517 Minisyncoccota bacterium 2053589 Bacteria Bacteria 65.5 2.76e-11   NR HTH93105.1 2053589 g77142 i0 44 0.872093023255814 75 36 81.4 4 222 13 44 117 HTH93105.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 225 65.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;