RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA966993" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA966993 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29583426 29583426 PRJNA966993_P_NODE_55970_length_290_cov_2.023041_g55518_i0 PRJNA966993 55970 290 2.023041 5.8668189 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 47.8 9.17e-4   NR MBQ7190478.1 2212473 g55518 i0 34.7 0.982758620689655 95 42 98.3 3 2 286 176 250 MBQ7190478.1 endonuclease/exonuclease/phosphatase family protein [Kiritimatiellia bacterium] diamond 285 47.8 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30026023 30026023 PRJNA966993_P_NODE_23131_length_437_cov_1.774725_g22684_i0 PRJNA966993 23131 437 1.774725 7.75554825 Kiritimatiellales bacterium 2202731 Bacteria Bacteria 125 1.61e-32   NR MCF7844914.1 2202731 g22684 i0 44.8 0.995423340961098 145 70 99.5 4 436 2 60 194 MCF7844914.1 6-phosphogluconolactonase [Kiritimatiellales bacterium] diamond 435 125 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales     Kiritimatiellales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;