RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA966993" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA966993 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26836141 26836141 PRJNA966993_P_NODE_2761_length_1207_cov_5.186949_g2516_i0 PRJNA966993 2761 1207 5.186949 62.60647443 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 188 2.4199999999999993e-52   NR MCT4592411.1 2044595 g2516 i0 32.2 0.825186412593206 332 221 82.5 3 97 1092 17 344 MCT4592411.1 mechanosensitive ion channel family protein [Candidatus Altimarinota bacterium] diamond 996 188 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31037241 31037241 PRJNA966993_P_NODE_44895_length_322_cov_1.546185_g44443_i0 PRJNA966993 44895 322 1.546185 4.9787157 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 47.8 0.00155   NR MBP7823431.1 2044595 g44443 i0 55.9 0.316770186335404 34 15 31.7 0 45 146 420 453 MBP7823431.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 102 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32302494 32302494 PRJNA966993_P_NODE_92259_length_245_cov_0.895349_g91807_i0 PRJNA966993 92259 245 0.895349 2.19360505 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 41.6 0.0335   NR MBP9779009.1 2044595 g91807 i0 43.8 0.587755102040816 48 26 58.8 1 222 79 57 103 MBP9779009.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 144 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;