RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA964500" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJNA964500 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28920501 28920501 PRJNA964500_S_NODE_8348_length_201_cov_4.186047_g8256_i0 PRJNA964500 8348 201 4.186047 8.41395447 Mitoviridae sp. 2809572 Viruses Viruses 109 7.880000000000001e-26   NR UJQ92562.1 2809572 g8256 i0 82.5 0.940298507462687 63 11 94 0 1 189 23 85 UJQ92562.1 MAG: putative RNA-dependent RNA polymerase [Mitoviridae sp.] diamond 189 109 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.
29236530 29236530 PRJNA964500_S_NODE_9_length_1972_cov_21.446217_g6_i0 PRJNA964500 9 1972 21.446217 422.91939924 Moloney murine leukemia virus 11801 Viruses Viruses 1251 0   NR NP_057933.2 11801 g6 i0 97.5 3.86409736308316 635 16 96.6 0 1906 2 677 1311 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 7620 1251 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
30158343 30158343 PRJNA964500_S_NODE_11492_length_177_cov_2.493243_g11400_i0 PRJNA964500 11492 177 2.493243 4.41304011 root 1 Root_unresolved Root_unresolved 104 2.88e-27   NR QXN72717.1 2835984 g11400 i0 80 4.76271186440678 55 11 93.2 0 170 6 31 85 QXN72717.1 HNH endonuclease [Rhodobacter phage RcZahn] diamond 843 105 0.990476190476191 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Rhodobacter phage RcZahn

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;