RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA951810" and tax_phylum = "Candidatus Anderseniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Anderseniibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28320553 28320553 PRJNA951810_P_NODE_188986_length_218_cov_5.048276_g188641_i0 PRJNA951810 188986 218 5.048276 11.00524168 Candidatus Anderseniibacteriota bacterium 2053502 Bacteria Bacteria 88.2 3.37e-19   NR HBE90688.1 2053502 g188641 i0 60.5 1.04587155963303 76 23 99.1 2 217 2 60 132 HBE90688.1 hypothetical protein [Candidatus Andersenbacteria bacterium] diamond 228 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Anderseniibacteriota         Candidatus Anderseniibacteriota bacterium
28415496 28415496 PRJNA951810_P_NODE_4186_length_897_cov_9.625000_g3970_i0 PRJNA951810 4186 897 9.625 86.33625 Candidatus Anderseniibacteriota bacterium 2053502 Bacteria Bacteria 146 7.91e-40   NR MEO6077184.1 2053502 g3970 i0 63.2 0.391304347826087 117 43 39.1 0 895 545 21 137 MEO6077184.1 hypothetical protein [Candidatus Andersenbacteria bacterium] diamond 351 146 1 Bacteria Bacteria candidate phyla   Candidatus Anderseniibacteriota         Candidatus Anderseniibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;