RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA951810" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27247035 27247035 PRJNA951810_P_NODE_93743_length_296_cov_3.502242_g93399_i0 PRJNA951810 93743 296 3.502242 10.36663632 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 191 7.35e-60   NR MDO4874256.1 2044595 g93399 i0 100 0.993243243243243 98 0 99.3 0 296 3 45 142 MDO4874256.1 ribosome recycling factor [Candidatus Altimarinota bacterium] diamond 294 191 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27594583 27594583 PRJNA951810_P_NODE_57104_length_310_cov_4.037975_g56761_i0 PRJNA951810 57104 310 4.037975 12.5177225 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 65.5 8.42e-10   NR NDK07627.1 2044595 g56761 i0 57.1 0.474193548387097 49 21 47.4 0 148 2 18 66 NDK07627.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 147 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29267571 29267571 PRJNA951810_P_NODE_147309_length_260_cov_3.021390_g146964_i0 PRJNA951810 147309 260 3.02139 7.855614 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 44.3 0.0112   NR MBP9779826.1 2044595 g146964 i0 41.8 1.32692307692308 55 26 56.5 2 255 109 187 241 MBP9779826.1 SIMPL domain-containing protein [Candidatus Altimarinota bacterium] diamond 345 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29652849 29652849 PRJNA951810_P_NODE_193950_length_206_cov_9.902256_g193605_i0 PRJNA951810 193950 206 9.902256 20.39864736 root 1 Root_unresolved Root_unresolved 64.3 4.75e-10   NR MBS9784038.1 2044595 g193605 i0 41.2 4.57281553398058 68 40 99 0 206 3 124 191 MBS9784038.1 30S ribosomal protein S5 [Candidatus Altimarinota bacterium] diamond 942 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29994303 29994303 PRJNA951810_P_NODE_45871_length_310_cov_6.928270_g45528_i0 PRJNA951810 45871 310 6.92827 21.477637 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 101 1.5100000000000001e-22   NR MBB1553987.1 2044595 g45528 i0 95.9 0.474193548387097 49 2 47.4 0 309 163 283 331 MBB1553987.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 147 101 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30878678 30878678 PRJNA951810_P_NODE_140234_length_265_cov_5.703125_g139889_i0 PRJNA951810 140234 265 5.703125 15.11328125 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 171 2.8399999999999994e-52   NR RAL56426.1 1914866 g139889 i0 95.5 0.99622641509434 88 4 99.6 0 2 265 15 102 RAL56426.1 dTMP kinase [Candidatus Gracilibacteria bacterium GN02-873] diamond 264 171 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
31011607 31011607 PRJNA951810_P_NODE_94994_length_295_cov_6.040541_g94650_i0 PRJNA951810 94994 295 6.040541 17.81959595 Bacteria 2 Bacteria Bacteria 112 3.18e-26   NR RKW23813.1 2044595 g94650 i0 81.8 1.34237288135593 66 12 67.1 0 2 199 688 753 RKW23813.1 MAG: hypothetical protein D8B45_02995 [Candidatus Altimarinota bacterium] diamond 396 112 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32838388 32838388 PRJNA951810_P_NODE_177440_length_235_cov_2.598765_g177095_i0 PRJNA951810 177440 235 2.598765 6.10709775 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 107 5.41e-25   NR MDO4873983.1 2044595 g177095 i0 98.2 0.714893617021277 56 1 71.5 0 1 168 551 606 MDO4873983.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Candidatus Altimarinota bacterium] diamond 168 107 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;