RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA951810" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA951810 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29488691 29488691 PRJNA951810_P_NODE_27890_length_381_cov_2.922078_g27548_i0 PRJNA951810 27890 381 2.922078 11.13311718 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 53.1 4.27e-5   NR XBH23991.1 3063761 g27548 i0 25.4 4.65354330708661 130 92 99.2 3 1 378 830 958 XBH23991.1 MAG: polyprotein, partial [Rousettus bat picornavirus] diamond 1773 53.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
29583240 29583240 PRJNA951810_P_NODE_182710_length_229_cov_2.448718_g182365_i0 PRJNA951810 182710 229 2.448718 5.60756422 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 78.2 1.05e-14   NR AVM87439.1 3063761 g182365 i0 45.8 1.08733624454148 83 38 99.6 1 229 2 996 1078 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 249 78.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
32333776 32333776 PRJNA951810_P_NODE_107299_length_288_cov_6.511628_g106955_i0 PRJNA951810 107299 288 6.511628 18.75348864 Penicillium janczewskii chrysovirus 2 1755793 Viruses Viruses 97.1 5.2400000000000006e-21   NR YP_009667015.1 1755793 g106955 i0 51.1 1.875 88 43 91.7 0 14 277 429 516 YP_009667015.1 ORF2 [Penicillium janczewskii chrysovirus 2] diamond 540 97.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Betachrysovirus Betachrysovirus secupenicillii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;