contig_metadata
16 rows where analysis = "diamond", bioproject = "PRJNA951412" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2210086 | 2210086 | PRJNA951412_P_NODE_4082_length_253_cov_0.866667_g3997_i0 | PRJNA951412 | 4082 | 253 | 0.866667 | 2.19266751 | Bacilli | 91061 | Bacteria | Bacteria | 62 | 2.74e-10 | NR | WP_340085477.1 | 1292 | g3997 | i0 | 85.7 | 2.07509881422925 | 35 | 5 | 41.5 | 0 | 148 | 252 | 31 | 65 | WP_340085477.1 reverse transcriptase family protein, partial [Staphylococcus warneri] | diamond | 525 | 62 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 14962625 | 14962625 | PRJNA951412_P_NODE_1852_length_337_cov_1.060606_g1767_i0 | PRJNA951412 | 1852 | 337 | 1.060606 | 3.57424222 | Streptococcus thermophilus | 1308 | Bacteria | Bacteria | 201 | 4.96e-58 | NR | TKW62483.1 | 1308 | g1767 | i0 | 84.7 | 0.98813056379822 | 111 | 17 | 98.8 | 0 | 3 | 335 | 606 | 716 | TKW62483.1 MAG: hypothetical protein DI612_08705, partial [Streptococcus thermophilus] | diamond | 333 | 201 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus thermophilus | ||
| 27221545 | 27221545 | PRJNA951412_P_NODE_7382_length_243_cov_0.917647_g7297_i0 | PRJNA951412 | 7382 | 243 | 0.917647 | 2.22988221 | Bacteria | 2 | Bacteria | Bacteria | 56.6 | 4.75e-7 | NR | MDE7334292.1 | 1898203 | g7297 | i0 | 50.9 | 4.35802469135802 | 57 | 28 | 70.4 | 0 | 68 | 238 | 462 | 518 | MDE7334292.1 carboxypeptidase regulatory-like domain-containing protein [Lachnospiraceae bacterium] | diamond | 1059 | 57 | 0.992982456140351 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 27436674 | 27436674 | PRJNA951412_P_NODE_7723_length_242_cov_0.923077_g7638_i0 | PRJNA951412 | 7723 | 242 | 0.923077 | 2.23384634 | Bacillales bacterium | 1904864 | Bacteria | Bacteria | 144 | 1.91e-42 | NR | HET7629728.1 | 1904864 | g7638 | i0 | 92.2 | 0.954545454545455 | 77 | 6 | 95.5 | 0 | 11 | 241 | 1 | 77 | HET7629728.1 transcriptional regulator SpxA [Bacillales bacterium] | diamond | 231 | 144 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillales bacterium | ||||
| 27499674 | 27499674 | PRJNA951412_P_NODE_5083_length_250_cov_0.870056_g4998_i0 | PRJNA951412 | 5083 | 250 | 0.870056 | 2.17514 | Jeotgalicoccus aerolatus | 709510 | Bacteria | Bacteria | 166 | 1.57e-45 | NR | WP_186089890.1 | 709510 | g4998 | i0 | 100 | 0.984 | 82 | 0 | 98.4 | 0 | 3 | 248 | 918 | 999 | WP_186089890.1 DNA polymerase III subunit alpha [Jeotgalicoccus aerolatus] | diamond | 246 | 166 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Jeotgalicoccus | Jeotgalicoccus aerolatus | ||
| 28667976 | 28667976 | PRJNA951412_P_NODE_5387_length_249_cov_0.875000_g5302_i0 | PRJNA951412 | 5387 | 249 | 0.875 | 2.17875 | Halanaerobacter jeridensis | 706427 | Bacteria | Bacteria | 136 | 3.3899999999999995e-35 | NR | WP_204702437.1 | 706427 | g5302 | i0 | 81.7 | 0.987951807228916 | 82 | 15 | 98.8 | 0 | 247 | 2 | 543 | 624 | WP_204702437.1 IGHMBP2 family helicase [Halanaerobacter jeridensis] | diamond | 246 | 136 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Halanaerobiales | Halobacteroidaceae | Halanaerobacter | Halanaerobacter jeridensis | ||
| 28888760 | 28888760 | PRJNA951412_P_NODE_7028_length_244_cov_0.912281_g6943_i0 | PRJNA951412 | 7028 | 244 | 0.912281 | 2.22596564 | Jeotgalicoccus halotolerans | 157227 | Bacteria | Bacteria | 112 | 4.75e-29 | NR | WP_115884264.1 | 157227 | g6943 | i0 | 92.2 | 0.786885245901639 | 64 | 5 | 78.7 | 0 | 240 | 49 | 144 | 207 | WP_115884264.1 phosphatase PAP2 family protein [Jeotgalicoccus halotolerans] | diamond | 192 | 112 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Jeotgalicoccus | Jeotgalicoccus halotolerans | ||
| 29053399 | 29053399 | PRJNA951412_P_NODE_4988_length_250_cov_0.875706_g4903_i0 | PRJNA951412 | 4988 | 250 | 0.875706 | 2.189265 | Lactobacillales | 186826 | Bacteria | Bacteria | 139 | 2.48e-40 | NR | WP_411412503.1 | 1351 | g4903 | i0 | 72.3 | 16.908 | 83 | 23 | 99.6 | 0 | 249 | 1 | 12 | 94 | WP_411412503.1 replication initiation protein, partial [Enterococcus faecalis] | diamond | 4227 | 139 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 29141652 | 29141652 | PRJNA951412_P_NODE_7269_length_244_cov_0.894737_g7184_i0 | PRJNA951412 | 7269 | 244 | 0.894737 | 2.18315828 | Halanaerobium congolense | 54121 | Bacteria | Bacteria | 119 | 6.03e-31 | NR | WP_089717047.1 | 54121 | g7184 | i0 | 90.9 | 0.811475409836066 | 66 | 6 | 81.1 | 0 | 45 | 242 | 95 | 160 | WP_089717047.1 type II TA system antitoxin MqsA family protein [Halanaerobium congolense] | diamond | 198 | 119 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Halanaerobiales | Halanaerobiaceae | Halanaerobium | Halanaerobium congolense | ||
| 29425388 | 29425388 | PRJNA951412_P_NODE_4369_length_252_cov_0.865922_g4284_i0 | PRJNA951412 | 4369 | 252 | 0.865922 | 2.18212344 | Paenibacillus fonticola | 379896 | Bacteria | Bacteria | 100 | 1.53e-22 | NR | WP_019639859.1 | 379896 | g4284 | i0 | 100 | 0.619047619047619 | 52 | 0 | 61.9 | 0 | 192 | 37 | 955 | 1006 | WP_019639859.1 hypothetical protein, partial [Paenibacillus fonticola] | diamond | 156 | 100 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus fonticola | ||
| 29520268 | 29520268 | PRJNA951412_P_NODE_7710_length_242_cov_0.923077_g7625_i0 | PRJNA951412 | 7710 | 242 | 0.923077 | 2.23384634 | Dialister invisus | 218538 | Bacteria | Bacteria | 103 | 2.9299999999999998e-24 | NR | WP_007069861.1 | 218538 | g7625 | i0 | 100 | 0.607438016528926 | 49 | 0 | 60.7 | 0 | 95 | 241 | 1 | 49 | WP_007069861.1 FAD:protein FMN transferase [Dialister invisus] | diamond | 147 | 103 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Dialister | Dialister invisus | ||
| 29677849 | 29677849 | PRJNA951412_P_NODE_6610_length_245_cov_0.906977_g6525_i0 | PRJNA951412 | 6610 | 245 | 0.906977 | 2.22209365 | Clostridia | 186801 | Bacteria | Bacteria | 70.9 | 3.71e-12 | NR | WP_173734999.1 | 186801 | g6525 | i0 | 43.5 | 0.844897959183673 | 69 | 38 | 83.3 | 1 | 204 | 1 | 90 | 158 | WP_173734999.1 MULTISPECIES: hypothetical protein [Clostridia] | diamond | 207 | 70.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | ||||||
| 29709349 | 29709349 | PRJNA951412_P_NODE_4570_length_251_cov_0.876404_g4485_i0 | PRJNA951412 | 4570 | 251 | 0.876404 | 2.19977404 | Bacillus | 1386 | Bacteria | Bacteria | 97.1 | 2.44e-21 | NR | WP_019243377.1 | 1386 | g4485 | i0 | 62.5 | 4.1593625498008 | 72 | 27 | 86.1 | 0 | 32 | 247 | 271 | 342 | WP_019243377.1 MULTISPECIES: polysaccharide deacetylase family protein [Bacillus] | diamond | 1044 | 97.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | |||
| 29842590 | 29842590 | PRJNA951412_P_NODE_5211_length_249_cov_0.886364_g5126_i0 | PRJNA951412 | 5211 | 249 | 0.886364 | 2.20704636 | Bacteria | 2 | Bacteria | Bacteria | 115 | 3.45e-29 | NR | MBQ7885699.1 | 2044939 | g5126 | i0 | 67.1 | 15.8072289156626 | 82 | 27 | 98.8 | 0 | 3 | 248 | 149 | 230 | MBQ7885699.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Clostridia bacterium] | diamond | 3936 | 116 | 0.991379310344828 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 32206940 | 32206940 | PRJNA951412_P_NODE_4978_length_250_cov_0.875706_g4893_i0 | PRJNA951412 | 4978 | 250 | 0.875706 | 2.189265 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 174 | 3.38e-51 | NR | MBZ4670016.1 | 2485925 | g4893 | i0 | 98.8 | 0.984 | 82 | 1 | 98.4 | 0 | 248 | 3 | 132 | 213 | MBZ4670016.1 hypothetical protein [Oscillospiraceae bacterium] | diamond | 246 | 174 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 32586663 | 32586663 | PRJNA951412_P_NODE_5779_length_248_cov_0.868571_g5694_i0 | PRJNA951412 | 5779 | 248 | 0.868571 | 2.15405608 | Anaerococcus | 165779 | Bacteria | Bacteria | 75.1 | 2.24e-14 | NR | WP_117520756.1 | 165779 | g5694 | i0 | 100 | 0.483870967741935 | 40 | 0 | 48.4 | 0 | 127 | 246 | 1 | 40 | WP_117520756.1 MULTISPECIES: CPBP family intramembrane glutamic endopeptidase [Anaerococcus] | diamond | 120 | 75.1 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;