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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA951412" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA951412 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26835850 26835850 PRJNA951412_P_NODE_3981_length_253_cov_2.577778_g3896_i0 PRJNA951412 3981 253 2.577778 6.52177834 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 58.2 7.01e-9   NR MCK9417194.1 2099670 g3896 i0 46.6 0.687747035573123 58 31 68.8 0 253 80 16 73 MCK9417194.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 174 58.2 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
29330825 29330825 PRJNA951412_P_NODE_7109_length_244_cov_0.906433_g7024_i0 PRJNA951412 7109 244 0.906433 2.21169652 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 75.5 1.12e-13   NR HRN96292.1 2052151 g7024 i0 53.6 1.0327868852459 84 36 99.6 1 243 1 491 574 HRN96292.1 O-antigen ligase family protein [Candidatus Levyibacteriota bacterium] diamond 252 75.5 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
31763955 31763955 PRJNA951412_P_NODE_6457_length_246_cov_0.890173_g6372_i0 PRJNA951412 6457 246 0.890173 2.18982558 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 75.1 1.61e-13   NR MEZ7892459.1 2053640 g6372 i0 43.2 1.92682926829268 81 46 98.8 0 243 1 874 954 MEZ7892459.1 NAD-glutamate dehydrogenase [Candidatus Wallbacteria bacterium] diamond 474 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
32112012 32112012 PRJNA951412_P_NODE_6758_length_245_cov_0.901163_g6673_i0 PRJNA951412 6758 245 0.901163 2.20784935 Patescibacteria group bacterium 2052139 Bacteria Bacteria 86.7 1.33e-17   NR MEA2056621.1 2052139 g6673 i0 53.7 1.00408163265306 82 33 94.3 3 235 5 585 666 MEA2056621.1 ribonucleoside-diphosphate reductase [Patescibacteria group bacterium] diamond 246 86.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32901233 32901233 PRJNA951412_P_NODE_6620_length_245_cov_0.906977_g6535_i0 PRJNA951412 6620 245 0.906977 2.22209365 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 66.2 2e-10   NR MBA3751283.1 2030827 g6535 i0 43.1 0.881632653061225 72 41 88.2 0 5 220 57 128 MBA3751283.1 BatD family protein [Candidatus Dependentiae bacterium] diamond 216 66.2 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;