contig_metadata
16 rows where analysis = "diamond", bioproject = "PRJNA951388" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16237564 | 16237564 | PRJNA951388_S_NODE_2773_length_462_cov_11.519280_g2646_i0 | PRJNA951388 | 2773 | 462 | 11.51928 | 53.2190736 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 176 | 1.4e-51 | NR | MDO9628701.1 | 1898209 | g2646 | i0 | 63.5 | 1.59090909090909 | 126 | 45 | 81.2 | 1 | 4 | 378 | 149 | 274 | MDO9628701.1 hypothetical protein [Acholeplasmataceae bacterium] | diamond | 735 | 176 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 27474541 | 27474541 | PRJNA951388_S_NODE_10103_length_260_cov_1.390374_g9976_i0 | PRJNA951388 | 10103 | 260 | 1.390374 | 3.6149724 | root | 1 | Root_unresolved | Root_unresolved | 81.6 | 5.62e-16 | NR | ACV20892.1 | 1396 | g9976 | i0 | 74.2 | 3.04615384615385 | 66 | 17 | 76.2 | 0 | 19 | 216 | 107 | 172 | ACV20892.1 enhanced green fluorescent protein [Bacillus cereus] | diamond | 792 | 81.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 27531127 | 27531127 | PRJNA951388_S_NODE_5923_length_348_cov_3.080000_g5796_i0 | PRJNA951388 | 5923 | 348 | 3.08 | 10.7184 | Candidatus Mycoplasma haematobovis | 432608 | Bacteria | Bacteria | 114 | 1.05e-26 | NR | WP_187150740.1 | 432608 | g5796 | i0 | 75.7 | 0.603448275862069 | 70 | 17 | 60.3 | 0 | 252 | 43 | 1152 | 1221 | WP_187150740.1 hypothetical protein [Candidatus Mycoplasma haematobovis] | diamond | 210 | 114 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Candidatus Mycoplasma haematobovis | ||
| 27664190 | 27664190 | PRJNA951388_S_NODE_4144_length_403_cov_3.696970_g4017_i0 | PRJNA951388 | 4144 | 403 | 3.69697 | 14.8987891 | Bacteria | 2 | Bacteria | Bacteria | 58.9 | 4.18e-7 | NR | WP_021800335.1 | 36845 | g4017 | i0 | 34.5 | 4.68982630272953 | 113 | 73 | 84.1 | 1 | 3 | 341 | 277 | 388 | WP_021800335.1 threonine ammonia-lyase [Clostridium intestinale] | diamond | 1890 | 58.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium intestinale | ||
| 27790429 | 27790429 | PRJNA951388_S_NODE_9264_length_274_cov_5.139303_g9137_i0 | PRJNA951388 | 9264 | 274 | 5.139303 | 14.08169022 | Bacteria | 2 | Bacteria | Bacteria | 141 | 1.7e-39 | NR | RCK76304.1 | 2052143 | g9137 | i0 | 75.6 | 21.5583941605839 | 90 | 22 | 98.5 | 0 | 4 | 273 | 159 | 248 | RCK76304.1 MAG: Phosphoglycerate mutase [Anaerolineae bacterium] | diamond | 5907 | 142 | 0.992957746478873 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 27822071 | 27822071 | PRJNA951388_S_NODE_11284_length_243_cov_2.264706_g11157_i0 | PRJNA951388 | 11284 | 243 | 2.264706 | 5.50323558 | root | 1 | Root_unresolved | Root_unresolved | 61.2 | 1.06e-8 | NR | ACV20892.1 | 1396 | g11157 | i0 | 54.4 | 4.76543209876543 | 79 | 36 | 97.5 | 0 | 1 | 237 | 153 | 231 | ACV20892.1 enhanced green fluorescent protein [Bacillus cereus] | diamond | 1158 | 61.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 28573050 | 28573050 | PRJNA951388_S_NODE_5487_length_360_cov_5.540070_g5360_i0 | PRJNA951388 | 5487 | 360 | 5.54007 | 19.944252 | Salinibacillus aidingensis | 237684 | Bacteria | Bacteria | 44.3 | 0.0379 | NR | WP_343844082.1 | 237684 | g5360 | i0 | 28.9 | 0.75 | 90 | 55 | 71.7 | 3 | 3 | 260 | 394 | 478 | WP_343844082.1 hypothetical protein [Salinibacillus aidingensis] | diamond | 270 | 44.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Salinibacillus | Salinibacillus aidingensis | ||
| 28762440 | 28762440 | PRJNA951388_S_NODE_11707_length_236_cov_3.306748_g11580_i0 | PRJNA951388 | 11707 | 236 | 3.306748 | 7.80392528 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 74.7 | 2.94e-14 | NR | WP_014849648.1 | 65123 | g11580 | i0 | 49.4 | 1.02966101694915 | 81 | 38 | 99.2 | 2 | 236 | 3 | 116 | 196 | WP_014849648.1 hypothetical protein [Mycoplasma wenyonii] | diamond | 243 | 74.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 29741045 | 29741045 | PRJNA951388_S_NODE_6890_length_324_cov_2.645418_g6763_i0 | PRJNA951388 | 6890 | 324 | 2.645418 | 8.57115432 | Synechococcaceae cyanobacterium SM2_3_2 | 2720471 | Bacteria | Bacteria | 43.9 | 0.00699 | NR | NJL98639.1 | 2720471 | g6763 | i0 | 50 | 0.37037037037037 | 40 | 20 | 37 | 0 | 297 | 178 | 29 | 68 | NJL98639.1 hypothetical protein [Synechococcaceae cyanobacterium SM2_3_2] | diamond | 120 | 43.9 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcaceae cyanobacterium SM2_3_2 | ||
| 30405145 | 30405145 | PRJNA951388_S_NODE_1933_length_519_cov_7.130045_g1810_i0 | PRJNA951388 | 1933 | 519 | 7.130045 | 37.00493355 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 78.2 | 1.37e-13 | NR | MBO5113168.1 | 1898203 | g1810 | i0 | 46.7 | 3.65895953757225 | 92 | 46 | 51.4 | 1 | 518 | 252 | 222 | 313 | MBO5113168.1 DnaJ domain-containing protein [Lachnospiraceae bacterium] | diamond | 1899 | 78.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 30910416 | 30910416 | PRJNA951388_S_NODE_2434_length_482_cov_8.092910_g2308_i0 | PRJNA951388 | 2434 | 482 | 8.09291 | 39.0078262 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 88.2 | 2.28e-19 | NR | MBQ5561215.1 | 1898203 | g2308 | i0 | 40.7 | 1.1701244813278 | 86 | 51 | 53.5 | 0 | 322 | 65 | 16 | 101 | MBQ5561215.1 thioredoxin [Lachnospiraceae bacterium] | diamond | 564 | 88.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 31352841 | 31352841 | PRJNA951388_S_NODE_8796_length_283_cov_2.200000_g8669_i0 | PRJNA951388 | 8796 | 283 | 2.2 | 6.226 | Pseudonocardia nigra | 1921578 | Bacteria | Bacteria | 44.7 | 0.0122 | NR | WP_246632054.1 | 1921578 | g8669 | i0 | 35.2 | 0.752650176678445 | 71 | 44 | 73.1 | 1 | 16 | 222 | 91 | 161 | WP_246632054.1 MFS transporter [Pseudonocardia nigra] | diamond | 213 | 44.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Pseudonocardia | Pseudonocardia nigra | ||
| 31352843 | 31352843 | PRJNA951388_S_NODE_9456_length_271_cov_1.555556_g9329_i0 | PRJNA951388 | 9456 | 271 | 1.555556 | 4.21555676 | Acutalibacteraceae bacterium | 3077420 | Bacteria | Bacteria | 189 | 4.5399999999999995e-57 | NR | MEE1353258.1 | 3077420 | g9329 | i0 | 100 | 0.996309963099631 | 90 | 0 | 99.6 | 0 | 271 | 2 | 57 | 146 | MEE1353258.1 nickel insertion protein [Acutalibacteraceae bacterium] | diamond | 270 | 189 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Acutalibacteraceae | Acutalibacteraceae bacterium | |||
| 31890424 | 31890424 | PRJNA951388_S_NODE_2897_length_456_cov_2.355091_g2770_i0 | PRJNA951388 | 2897 | 456 | 2.355091 | 10.73921496 | Allobacillus | 1400133 | Bacteria | Bacteria | 46.6 | 0.0148 | NR | WP_186279493.1 | 1400133 | g2770 | i0 | 37 | 0.480263157894737 | 73 | 42 | 45.4 | 1 | 182 | 388 | 4 | 76 | WP_186279493.1 MULTISPECIES: ATP-dependent DNA helicase DinG [Allobacillus] | diamond | 219 | 46.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Allobacillus | |||
| 32238807 | 32238807 | PRJNA951388_S_NODE_11498_length_240_cov_2.706587_g11371_i0 | PRJNA951388 | 11498 | 240 | 2.706587 | 6.4958088 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 98.2 | 1.14e-21 | NR | WP_112665124.1 | 65123 | g11371 | i0 | 62.7 | 1.0375 | 83 | 28 | 100 | 1 | 240 | 1 | 921 | 1003 | WP_112665124.1 DUF3713 domain-containing protein [Mycoplasma wenyonii] | diamond | 249 | 98.2 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 32245420 | 32245420 | PRJNA951388_S_NODE_6118_length_343_cov_2.777778_g5991_i0 | PRJNA951388 | 6118 | 343 | 2.777778 | 9.52777854 | root | 1 | Root_unresolved | Root_unresolved | 58.5 | 3.01e-7 | NR | WP_013859697.1 | 1398 | g5991 | i0 | 43.3 | 3.6997084548105 | 97 | 27 | 83.1 | 2 | 341 | 57 | 35 | 105 | WP_013859697.1 molecular chaperone DnaJ [Heyndrickxia coagulans] | diamond | 1269 | 58.9 | 0.99320882852292 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Heyndrickxia | Heyndrickxia coagulans |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;