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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA950981" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA950981 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2209163 2209163 PRJNA950981_P_NODE_19782_length_246_cov_0.901734_g19606_i0 PRJNA950981 19782 246 0.901734 2.21826564 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 75.5 1.18e-13   NR OQR82037.1 74557 g19606 i0 53.3 4.39024390243902 60 28 73.2 0 67 246 18 77 OQR82037.1 leucyl-tRNA synthetase, cytoplasmic [Thraustotheca clavata] diamond 1080 75.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
21664782 21664782 PRJNA950981_P_NODE_13937_length_276_cov_1.408867_g13761_i0 PRJNA950981 13937 276 1.408867 3.88847292 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 128 4.009999999999999e-32   NR KAG1683926.1 4784 g13761 i0 66.3 27.9782608695652 89 30 96.7 0 276 10 418 506 KAG1683926.1 hypothetical protein DVH05_012501 [Phytophthora capsici] diamond 7722 128 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
27380032 27380032 PRJNA950981_P_NODE_13463_length_281_cov_1.125000_g13287_i0 PRJNA950981 13463 281 1.125 3.16125 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 161 1.21e-47   NR POM64608.1 4796 g13287 i0 84.8 14.7330960854093 92 14 98.2 0 3 278 25 116 POM64608.1 Cell differentiation protein rcd1 [Phytophthora palmivora] diamond 4140 161 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
27531087 27531087 PRJNA950981_P_NODE_21543_length_242_cov_0.923077_g21367_i0 PRJNA950981 21543 242 0.923077 2.23384634 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 72.8 9.46e-13   NR DAZ98753.1 4803 g21367 i0 52.8 1.92148760330579 72 33 89.3 1 25 240 4 74 DAZ98753.1 TPA: hypothetical protein N0F65_003809 [Lagenidium giganteum] diamond 465 72.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
27594395 27594395 PRJNA950981_P_NODE_19384_length_247_cov_0.896552_g19208_i0 PRJNA950981 19384 247 0.896552 2.21448344 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 115 2.4e-28   NR KAF0688604.1 120398 g19208 i0 64.2 0.983805668016194 81 29 98.4 0 245 3 244 324 KAF0688604.1 hypothetical protein As57867_019712 [Aphanomyces stellatus] diamond 243 115 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
27594397 27594397 PRJNA950981_P_NODE_7144_length_370_cov_0.747475_g6968_i0 PRJNA950981 7144 370 0.747475 2.7656575 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 82 2.82e-15   NR RHX99013.1 112090 g6968 i0 42.1 4.08648648648649 126 63 99.7 2 369 1 426 544 RHX99013.1 hypothetical protein DYB36_009748 [Aphanomyces astaci] diamond 1512 82 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
28421957 28421957 PRJNA950981_P_NODE_20226_length_245_cov_0.906977_g20050_i0 PRJNA950981 20226 245 0.906977 2.22209365 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 65.5 2.08e-10   NR KAF1327062.1 82926 g20050 i0 44.3 1.95918367346939 79 42 96.7 1 238 2 27 103 KAF1327062.1 Guanylate kinase, partial [Globisporangium splendens] diamond 480 65.9 0.993930197268589 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28509961 28509961 PRJNA950981_P_NODE_11507_length_302_cov_1.620087_g11331_i0 PRJNA950981 11507 302 1.620087 4.89266274 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 49.7 2.57e-4   NR RHY25324.1 112090 g11331 i0 51.9 0.764900662251656 77 37 76.5 0 300 70 220 296 RHY25324.1 hypothetical protein DYB25_003324 [Aphanomyces astaci] diamond 231 49.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
28604660 28604660 PRJNA950981_P_NODE_16507_length_253_cov_0.866667_g16331_i0 PRJNA950981 16507 253 0.866667 2.19266751 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.0019   NR OQR84814.1 1202772 g16331 i0 33.3 0.889328063241107 75 50 88.9 0 22 246 177 251 OQR84814.1 importin-like protein [Achlya hypogyna] diamond 225 46.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
29299290 29299290 PRJNA950981_P_NODE_13029_length_285_cov_1.471698_g12853_i0 PRJNA950981 13029 285 1.471698 4.1943393 Phytophthora boehmeriae 109152 SAR_Eukaryotes SAR_Eukaryotes 79.3 1.13e-15   NR KAG7399116.1 109152 g12853 i0 51.1 0.989473684210526 94 44 96.8 1 9 284 12 105 KAG7399116.1 Nucleoside diphosphate kinase III, chloroplastic/mitochondrial [Phytophthora boehmeriae] diamond 282 79.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
29337456 29337456 PRJNA950981_P_NODE_17689_length_250_cov_1.745763_g17513_i0 PRJNA950981 17689 250 1.745763 4.3644075 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 75.1 6.52e-14   NR KAG1683943.1 4784 g17513 i0 42.9 6.096 84 46 98.4 1 250 5 179 262 KAG1683943.1 hypothetical protein DVH05_012284 [Phytophthora capsici] diamond 1524 75.5 0.994701986754967 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
29583117 29583117 PRJNA950981_P_NODE_13250_length_283_cov_1.314286_g13074_i0 PRJNA950981 13250 283 1.314286 3.71942938 Phytophthora capsici 4784 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.013   NR KAG1689414.1 4784 g13074 i0 33.3 1.68551236749117 81 39 70 3 71 268 796 876 KAG1689414.1 hypothetical protein DVH05_002215 [Phytophthora capsici] diamond 477 44.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
29994103 29994103 PRJNA950981_P_NODE_17131_length_252_cov_0.871508_g16955_i0 PRJNA950981 17131 252 0.871508 2.19620016 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 139 1.0299999999999998e-37   NR KAG9414105.1 112091 g16955 i0 88 5.90476190476191 83 10 98.8 0 251 3 54 136 KAG9414105.1 Histone-arginine methyltransferase carm1 [Aphanomyces cochlioides] diamond 1488 139 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
30499528 30499528 PRJNA950981_P_NODE_17433_length_251_cov_0.876404_g17257_i0 PRJNA950981 17433 251 0.876404 2.19977404 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 138 8.5000000000000007e-36   NR XP_024585418.1 4781 g17257 i0 74.4 2.92828685258964 82 21 98 0 251 6 640 721 XP_024585418.1 valine-trna partial [Plasmopara halstedii] diamond 735 138 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
31257813 31257813 PRJNA950981_P_NODE_14535_length_270_cov_1.979695_g14359_i0 PRJNA950981 14535 270 1.979695 5.3451765 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 79.3 7.1e-15   NR XP_009838760.1 112090 g14359 i0 46.2 9.07777777777778 91 45 96.7 1 2 262 3861 3951 XP_009838760.1 hypothetical protein H257_13041 [Aphanomyces astaci] diamond 2451 79.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
31352809 31352809 PRJNA950981_P_NODE_956_length_934_cov_4.781649_g829_i0 PRJNA950981 956 934 4.781649 44.66060166 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 59.3 1.16e-5   NR GLD93914.1 114742 g829 i0 54.9 0.668094218415418 51 21 15.7 1 316 462 330 380 GLD93914.1 hypothetical protein PINS_up002519 [Pythium insidiosum] diamond 624 59.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31605830 31605830 PRJNA950981_P_NODE_12136_length_295_cov_1.234234_g11960_i0 PRJNA950981 12136 295 1.234234 3.6409903 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 140 3.45e-39   NR KAH9116551.1 100861 g11960 i0 75 0.935593220338983 92 21 91.5 2 270 1 3 94 KAH9116551.1 hypothetical protein AeMF1_009507 [Aphanomyces euteiches] diamond 276 140 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
31953649 31953649 PRJNA950981_P_NODE_20757_length_244_cov_0.912281_g20581_i0 PRJNA950981 20757 244 0.912281 2.22596564 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 52 2.11e-5   NR KAF1325803.1 82926 g20581 i0 38 0.971311475409836 79 48 97.1 1 8 244 775 852 KAF1325803.1 Ap-1 complex subunit beta, partial [Globisporangium splendens] diamond 237 52 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
32055150 32055150 PRJNA950981_P_NODE_17498_length_251_cov_0.876404_g17322_i0 PRJNA950981 17498 251 0.876404 2.19977404 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 86.3 2.02e-17   NR KAH9070578.1 100861 g17322 i0 50 4.66135458167331 78 39 93.2 0 244 11 1274 1351 KAH9070578.1 hypothetical protein Ae201684P_002935 [Aphanomyces euteiches] diamond 1170 86.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
32333736 32333736 PRJNA950981_P_NODE_17379_length_251_cov_0.876404_g17203_i0 PRJNA950981 17379 251 0.876404 2.19977404 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 118 4.19e-30   NR KAF0689689.1 120398 g17203 i0 69.5 0.9800796812749 82 25 98 0 250 5 111 192 KAF0689689.1 hypothetical protein As57867_018808 [Aphanomyces stellatus] diamond 246 118 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
32333738 32333738 PRJNA950981_P_NODE_5359_length_420_cov_2.089337_g5183_i0 PRJNA950981 5359 420 2.089337 8.7752154 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 70.5 3.17e-11   NR XP_009526256.1 67593 g5183 i0 50.5 1.3 91 39 65 2 101 373 231 315 XP_009526256.1 hypothetical protein PHYSODRAFT_354553 [Phytophthora sojae] diamond 546 70.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
32466860 32466860 PRJNA950981_P_NODE_17619_length_251_cov_0.876404_g17443_i0 PRJNA950981 17619 251 0.876404 2.19977404 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 164 1.2999999999999999e-46   NR XP_009832428.1 112090 g17443 i0 88 2.97609561752988 83 10 99.2 0 3 251 289 371 XP_009832428.1 hypothetical protein H257_08298 [Aphanomyces astaci] diamond 747 165 0.993939393939394 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
32617903 32617903 PRJNA950981_P_NODE_16980_length_252_cov_0.871508_g16804_i0 PRJNA950981 16980 252 0.871508 2.19620016 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 67.4 5.06e-11   NR DAZ97105.1 4803 g16804 i0 39.2 0.94047619047619 79 45 92.9 2 2 235 194 270 DAZ97105.1 TPA: hypothetical protein N0F65_010428 [Lagenidium giganteum] diamond 237 67.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
32876337 32876337 PRJNA950981_P_NODE_8520_length_343_cov_2.051852_g8344_i0 PRJNA950981 8520 343 2.051852 7.03785236 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 185 4.94e-57   NR KAL0583279.1 65357 g8344 i0 75.2 6.91836734693878 113 28 98.8 0 339 1 22 134 KAL0583279.1 hypothetical protein ABG067_006780 [Albugo candida] diamond 2373 185 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;