RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA950981" and tax_phylum = "Echinodermata"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA950981 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26715192 26715192 PRJNA950981_P_NODE_7881_length_355_cov_1.645390_g7705_i0 PRJNA950981 7881 355 1.64539 5.8411345 Metazoa 33208 Echinodermata other_Eukaryota 124 2.43e-33   NR XP_030852344.1 7668 g7705 i0 56.1 5.45070422535211 107 43 87.9 2 351 40 45 150 XP_030852344.1 thioredoxin domain-containing protein 12-like [Strongylocentrotus purpuratus] diamond 1935 125 0.992 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
27752329 27752329 PRJNA950981_P_NODE_13744_length_278_cov_1.404878_g13568_i0 PRJNA950981 13744 278 1.404878 3.90556084 Anneissia japonica 1529436 Echinodermata other_Eukaryota 119 5.79e-32   NR XP_033096589.1 1529436 g13568 i0 80.6 11.158273381295 72 13 76.6 1 63 275 35 106 XP_033096589.1 methylmalonyl-CoA epimerase, mitochondrial-like [Anneissia japonica] diamond 3102 119 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
27822063 27822063 PRJNA950981_P_NODE_13864_length_277_cov_1.147059_g13688_i0 PRJNA950981 13864 277 1.147059 3.17735343 root 1 Root_unresolved Root_unresolved 108 5.62e-26   NR XP_033646815.1 7604 g13688 i0 50.5 4.9927797833935 93 44 98.6 2 274 2 121 213 XP_033646815.1 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2-like [Asterias rubens] diamond 1383 109 0.990825688073395 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
30158282 30158282 PRJNA950981_P_NODE_17532_length_251_cov_0.876404_g17356_i0 PRJNA950981 17532 251 0.876404 2.19977404 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.5 1.91e-9   NR XP_038053802.1 46514 g17356 i0 50.9 2.85657370517928 55 27 65.7 0 249 85 197 251 XP_038053802.1 switch-associated protein 70-like [Patiria miniata] diamond 717 63.9 0.993740219092332 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
30436589 30436589 PRJNA950981_P_NODE_6193_length_394_cov_0.971963_g6017_i0 PRJNA950981 6193 394 0.971963 3.82953422 Acanthaster planci 133434 Echinodermata other_Eukaryota 52 7.66e-5   NR XP_022085782.1 133434 g6017 i0 45.5 2.87817258883249 55 27 39.6 1 13 168 93 147 XP_022085782.1 glutathione S-transferase theta-1-like isoform X1 [Acanthaster planci] diamond 1134 52 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
30752326 30752326 PRJNA950981_P_NODE_20574_length_244_cov_0.912281_g20398_i0 PRJNA950981 20574 244 0.912281 2.22596564 Diadema antillarum 105358 Echinodermata other_Eukaryota 56.2 6.65e-7   NR XP_071499141.1 105358 g20398 i0 44.4 0.885245901639344 72 31 88.5 2 233 18 2046 2108 XP_071499141.1 uncharacterized protein [Diadema antillarum] diamond 216 56.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
32593131 32593131 PRJNA950981_P_NODE_14679_length_269_cov_1.346939_g14503_i0 PRJNA950981 14679 269 1.346939 3.62326591 Metazoa 33208 Echinodermata other_Eukaryota 88.6 3.63e-18   NR XP_033641496.1 7604 g14503 i0 46.7 3 90 46 99.3 2 1 267 356 444 XP_033641496.1 cystathionine beta-synthase-like [Asterias rubens] diamond 807 89 0.995505617977528 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;