RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA949785" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA949785 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29084959 29084959 PRJNA949785_P_NODE_1168_length_1092_cov_2.736997_g1052_i0 PRJNA949785 1168 1092 2.736997 29.88800724 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 49.7 0.0172   NR XP_002675654.1 5762 g1052 i0 43.4 0.917582417582418 53 30 14.6 0 251 93 450 502 XP_002675654.1 uncharacterized protein NAEGRDRAFT_80282 [Naegleria gruberi] diamond 1002 50.1 0.992015968063872 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31738676 31738676 PRJNA949785_P_NODE_4697_length_522_cov_2.004454_g4501_i0 PRJNA949785 4697 522 2.004454 10.46324988 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 96.3 5.81e-20   NR XP_044561128.1 5763 g4501 i0 35.1 5.91954022988506 154 90 82.8 1 489 58 220 373 XP_044561128.1 uncharacterized protein FDP41_004314 [Naegleria fowleri] diamond 3090 97.1 0.991761071060762 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;