RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA949785" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA949785 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29930946 29930946 PRJNA949785_P_NODE_16311_length_249_cov_0.875000_g16114_i0 PRJNA949785 16311 249 0.875 2.17875 Thermoproteota archaeon 2056631 Archaea Archaea 120 1.85e-32   NR MDT7864685.1 2056631 g16114 i0 98.3 0.72289156626506 60 1 72.3 0 247 68 113 172 MDT7864685.1 hypothetical protein [Thermoproteota archaeon] diamond 180 120 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32743989 32743989 PRJNA949785_P_NODE_14360_length_264_cov_1.209424_g14163_i0 PRJNA949785 14360 264 1.209424 3.19287936 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 75.9 6.01e-14   NR HET8792660.1 2169593 g14163 i0 36.4 1 88 55 100 1 264 1 117 203 HET8792660.1 DnaJ C-terminal domain-containing protein [Nitrososphaeraceae archaeon] diamond 264 75.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32744001 32744001 PRJNA949785_P_NODE_4100_length_568_cov_1.747475_g3909_i0 PRJNA949785 4100 568 1.747475 9.925658 Candidatus Culexarchaeum yellowstonense 2928963 Archaea Archaea 121 3e-29   NR WP_304329670.1 2928963 g3909 i0 37.5 1.80105633802817 192 111 99.8 4 1 567 66 251 WP_304329670.1 RNA 3'-terminal phosphate cyclase [Candidatus Culexarchaeum yellowstonense] diamond 1023 121 1 Archaea   Thermoproteati Candidatus Culexarchaeota Candidatus Culexarchaeia Candidatus Culexarchaeles Candidatus Culexarchaeaceae Candidatus Culexarchaeum Candidatus Culexarchaeum yellowstonense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;