RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA946307" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA946307 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27057149 27057149 PRJNA946307_P_NODE_69682_length_199_cov_3.140000_g68808_i0 PRJNA946307 69682 199 3.14 6.2486 Candidatus Aquilonibacter sp. 2952903 Bacteria Bacteria 84.3 4.6e-17   NR HTU40945.1 2952903 g68808 i0 49.5 3.22613065326633 107 8 92 1 17 199 172 278 HTU40945.1 thiamine pyrophosphate-dependent enzyme [Candidatus Aquilonibacter sp.] diamond 642 84.3 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Aquilonibacter Candidatus Aquilonibacter sp.
27183376 27183376 PRJNA946307_P_NODE_89422_length_189_cov_1.385714_g88548_i0 PRJNA946307 89422 189 1.385714 2.61899946 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 123 7.149999999999999e-31   NR HXX15427.1 3069296 g88548 i0 90 1.87301587301587 60 6 95.2 0 9 188 269 328 HXX15427.1 glycoside hydrolase family 127 protein [Candidatus Eremiobacteraceae bacterium] diamond 354 123 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium
27373416 27373416 PRJNA946307_P_NODE_58023_length_210_cov_2.602484_g57149_i0 PRJNA946307 58023 210 2.602484 5.4652164 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 63.2 1.48e-9   NR HZW94322.1 3069296 g57149 i0 68.5 0.771428571428571 54 17 77.1 0 209 48 89 142 HZW94322.1 GGDEF domain-containing protein [Candidatus Eremiobacteraceae bacterium] diamond 162 63.2 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium
28572947 28572947 PRJNA946307_P_NODE_79427_length_194_cov_3.710345_g78553_i0 PRJNA946307 79427 194 3.710345 7.1980693 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 42 0.0148   NR HMD01634.1 2952909 g78553 i0 32.7 0.850515463917526 55 33 85.1 1 28 192 8 58 HMD01634.1 hypothetical protein [Candidatus Baltobacteraceae bacterium] diamond 165 42 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
32080059 32080059 PRJNA946307_P_NODE_116458_length_177_cov_1.273438_g115584_i0 PRJNA946307 116458 177 1.273438 2.25398526 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 53.9 1.69e-6   NR HUD46661.1 2952909 g115584 i0 51.9 2.74576271186441 54 18 91.5 1 176 15 150 195 HUD46661.1 hypothetical protein [Candidatus Baltobacteraceae bacterium] diamond 486 53.9 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
32396648 32396648 PRJNA946307_P_NODE_122319_length_174_cov_1.656000_g121445_i0 PRJNA946307 122319 174 1.656 2.88144 Candidatus Aquilonibacter sp. 2952903 Bacteria Bacteria 106 2.31e-25   NR HTV08331.1 2952903 g121445 i0 79.3 2 58 12 100 0 174 1 220 277 HTV08331.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Candidatus Aquilonibacter sp.] diamond 348 106 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Aquilonibacter Candidatus Aquilonibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;