contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA946307" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27057097 | 27057097 | PRJNA946307_P_NODE_161062_length_162_cov_1.707965_g160188_i0 | PRJNA946307 | 161062 | 162 | 1.707965 | 2.7669033 | Bursaphelenchus okinawaensis | 465554 | Nematoda | Nematoda | 41.2 | 0.0434 | NR | CAD5215308.1 | 465554 | g160188 | i0 | 47.4 | 0.703703703703704 | 38 | 20 | 70.4 | 0 | 115 | 2 | 28 | 65 | CAD5215308.1 unnamed protein product [Bursaphelenchus okinawaensis] | diamond | 114 | 41.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Bursaphelenchus | Bursaphelenchus okinawaensis | |
| 27499518 | 27499518 | PRJNA946307_P_NODE_37083_length_217_cov_3.714286_g36209_i0 | PRJNA946307 | 37083 | 217 | 3.714286 | 8.06000062 | Diploscapter pachys | 2018661 | Nematoda | Nematoda | 108 | 2.3e-25 | NR | PAV62744.1 | 2018661 | g36209 | i0 | 98.2 | 0.76036866359447 | 55 | 1 | 76 | 0 | 208 | 44 | 198 | 252 | PAV62744.1 hypothetical protein WR25_22970 [Diploscapter pachys] | diamond | 165 | 108 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Diploscapter | Diploscapter pachys | |
| 29172965 | 29172965 | PRJNA946307_P_NODE_112249_length_178_cov_4.162791_g111375_i0 | PRJNA946307 | 112249 | 178 | 4.162791 | 7.40976798 | Gongylonema pulchrum | 637853 | Nematoda | Nematoda | 48.1 | 1.36e-4 | NR | VDN43907.1 | 637853 | g111375 | i0 | 40 | 1.80337078651685 | 55 | 33 | 92.7 | 0 | 12 | 176 | 113 | 167 | VDN43907.1 unnamed protein product, partial [Gongylonema pulchrum] | diamond | 321 | 48.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Gongylonematidae | Gongylonema | Gongylonema pulchrum | |
| 29274077 | 29274077 | PRJNA946307_P_NODE_148529_length_165_cov_1.655172_g147655_i0 | PRJNA946307 | 148529 | 165 | 1.655172 | 2.7310338 | Rhabditida | 6236 | Nematoda | Nematoda | 47.8 | 2.19e-4 | NR | KAI3413389.1 | 36090 | g147655 | i0 | 55.6 | 4 | 36 | 16 | 65.5 | 0 | 45 | 152 | 125 | 160 | KAI3413389.1 hypothetical protein GPALN_010885 [Globodera pallida] | diamond | 660 | 47.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Heteroderidae | Globodera | Globodera pallida | |
| 29425280 | 29425280 | PRJNA946307_P_NODE_83969_length_191_cov_3.781690_g83095_i0 | PRJNA946307 | 83969 | 191 | 3.78169 | 7.2230279 | Mesorhabditis belari | 2138241 | Nematoda | Nematoda | 63.9 | 6.21e-10 | NR | CAJ0944014.1 | 2138241 | g83095 | i0 | 32.5 | 3.94240837696335 | 126 | 16 | 89.5 | 1 | 172 | 2 | 52 | 177 | CAJ0944014.1 unnamed protein product, partial [Mesorhabditis belari] | diamond | 753 | 63.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Mesorhabditis | Mesorhabditis belari | |
| 29709225 | 29709225 | PRJNA946307_P_NODE_67990_length_199_cov_3.746667_g67116_i0 | PRJNA946307 | 67990 | 199 | 3.746667 | 7.45586733 | Trichuris suis | 68888 | Nematoda | Nematoda | 49.7 | 4.72e-5 | NR | KFD64059.1 | 68888 | g67116 | i0 | 32.1 | 5.06532663316583 | 84 | 33 | 90.5 | 1 | 183 | 4 | 111 | 194 | KFD64059.1 hypothetical protein M514_23769 [Trichuris suis] | diamond | 1008 | 49.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichuridae | Trichuris | Trichuris suis | |
| 30151592 | 30151592 | PRJNA946307_P_NODE_58012_length_210_cov_2.602484_g57138_i0 | PRJNA946307 | 58012 | 210 | 2.602484 | 5.4652164 | Onchocerca ochengi | 42157 | Nematoda | Nematoda | 43.9 | 5.57e-4 | NR | VDK81991.1 | 42157 | g57138 | i0 | 81.8 | 0.314285714285714 | 22 | 4 | 31.4 | 0 | 17 | 82 | 1 | 22 | VDK81991.1 unnamed protein product, partial [Onchocerca ochengi] | diamond | 66 | 43.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Onchocerca | Onchocerca ochengi | |
| 30499352 | 30499352 | PRJNA946307_P_NODE_113293_length_178_cov_1.883721_g112419_i0 | PRJNA946307 | 113293 | 178 | 1.883721 | 3.35302338 | Enterobius vermicularis | 51028 | Nematoda | Nematoda | 46.6 | 6.96e-4 | NR | VDD89705.1 | 51028 | g112419 | i0 | 42.6 | 0.910112359550562 | 54 | 27 | 86 | 2 | 14 | 166 | 792 | 844 | VDD89705.1 unnamed protein product [Enterobius vermicularis] | diamond | 162 | 46.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Oxyuridae | Enterobius | Enterobius vermicularis | |
| 30941912 | 30941912 | PRJNA946307_P_NODE_51534_length_210_cov_3.329193_g50660_i0 | PRJNA946307 | 51534 | 210 | 3.329193 | 6.9913053 | Diploscapter pachys | 2018661 | Nematoda | Nematoda | 63.2 | 1.51e-9 | NR | PAV59715.1 | 2018661 | g50660 | i0 | 100 | 0.4 | 28 | 0 | 40 | 0 | 206 | 123 | 669 | 696 | PAV59715.1 hypothetical protein WR25_23698 [Diploscapter pachys] | diamond | 84 | 63.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Diploscapter | Diploscapter pachys | |
| 31036840 | 31036840 | PRJNA946307_P_NODE_69815_length_199_cov_3.133333_g68941_i0 | PRJNA946307 | 69815 | 199 | 3.133333 | 6.23533267 | Dictyocaulus viviparus | 29172 | Nematoda | Nematoda | 53.9 | 2.39e-6 | NR | KJH47222.1 | 29172 | g68941 | i0 | 68.8 | 2.35175879396985 | 32 | 7 | 43.7 | 1 | 198 | 112 | 114 | 145 | KJH47222.1 Ras family protein [Dictyocaulus viviparus] | diamond | 468 | 53.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Metastrongylidae | Dictyocaulus | Dictyocaulus viviparus | |
| 31257732 | 31257732 | PRJNA946307_P_NODE_76715_length_196_cov_3.816327_g75841_i0 | PRJNA946307 | 76715 | 196 | 3.816327 | 7.48000092 | Haemonchus placei | 6290 | Nematoda | Nematoda | 44.3 | 0.00218 | NR | VDO75969.1 | 6290 | g75841 | i0 | 35.6 | 3.62755102040816 | 59 | 24 | 90.3 | 1 | 190 | 14 | 49 | 93 | VDO75969.1 unnamed protein product [Haemonchus placei] | diamond | 711 | 44.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Trichostrongylidae | Haemonchus | Haemonchus placei | |
| 31896976 | 31896976 | PRJNA946307_P_NODE_36977_length_217_cov_8.339286_g36103_i0 | PRJNA946307 | 36977 | 217 | 8.339286 | 18.09625062 | Rhabditida | 6236 | Nematoda | Nematoda | 48.1 | 1.7e-4 | NR | CAJ0609498.1 | 53992 | g36103 | i0 | 85.7 | 1.16129032258065 | 21 | 3 | 29 | 0 | 14 | 76 | 78 | 98 | CAJ0609498.1 unnamed protein product [Cylicocyclus nassatus] | diamond | 252 | 48.5 | 0.991752577319588 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongylidae | Cylicocyclus | Cylicocyclus nassatus | |
| 31985139 | 31985139 | PRJNA946307_P_NODE_146238_length_166_cov_0.871795_g145364_i0 | PRJNA946307 | 146238 | 166 | 0.871795 | 1.4471797 | Trichinella sp. T8 | 92180 | Nematoda | Nematoda | 42 | 0.0166 | NR | KRZ82471.1 | 92180 | g145364 | i0 | 38 | 0.903614457831325 | 50 | 31 | 90.4 | 0 | 164 | 15 | 79 | 128 | KRZ82471.1 hypothetical protein T08_2499 [Trichinella sp. T8] | diamond | 150 | 42 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichinellidae | Trichinella | Trichinella sp. T8 | |
| 32143444 | 32143444 | PRJNA946307_P_NODE_113938_length_178_cov_1.496124_g113064_i0 | PRJNA946307 | 113938 | 178 | 1.496124 | 2.66310072 | Ancylostoma ceylanicum | 53326 | Nematoda | Nematoda | 44.3 | 0.00407 | NR | EYC31549.1 | 53326 | g113064 | i0 | 50 | 1.8876404494382 | 34 | 17 | 57.3 | 0 | 8 | 109 | 157 | 190 | EYC31549.1 hypothetical protein Y032_0004g2213 [Ancylostoma ceylanicum] | diamond | 336 | 44.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Ancylostomatidae | Ancylostoma | Ancylostoma ceylanicum | |
| 32333636 | 32333636 | PRJNA946307_P_NODE_45799_length_210_cov_4.795031_g44925_i0 | PRJNA946307 | 45799 | 210 | 4.795031 | 10.0695651 | Auanema sp. JU1783 | 2878363 | Nematoda | Nematoda | 73.6 | 2.26e-13 | NR | CAI4231116.1 | 2878363 | g44925 | i0 | 64.4 | 0.842857142857143 | 59 | 11 | 70 | 1 | 33 | 179 | 31 | 89 | CAI4231116.1 unnamed protein product [Auanema sp. JU1783] | diamond | 177 | 73.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Auanema | Auanema sp. JU1783 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;