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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA946307" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA946307 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27120026 27120026 PRJNA946307_P_NODE_95162_length_186_cov_2.510949_g94288_i0 PRJNA946307 95162 186 2.510949 4.67036514 Chrysochloris asiatica 185453 Chordata Chordata 45.4 0.00137   NR XP_006878228.1 185453 g94288 i0 54.4 0.919354838709677 57 21 91.9 2 2 172 103 154 XP_006878228.1 PREDICTED: LOW QUALITY PROTEIN: putative uncharacterized protein encoded by RNF165-IT1-like [Chrysochloris asiatica] diamond 171 45.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia   Chrysochloridae Chrysochloris Chrysochloris asiatica
27278433 27278433 PRJNA946307_P_NODE_90743_length_188_cov_2.503597_g89869_i0 PRJNA946307 90743 188 2.503597 4.70676236 Vulpes lagopus 494514 Chordata Chordata 42.7 0.0182   NR XP_041596778.1 494514 g89869 i0 51.4 1.11702127659574 35 17 55.9 0 115 11 43 77 XP_041596778.1 cationic amino acid transporter 3 isoform X2 [Vulpes lagopus] diamond 210 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Vulpes Vulpes lagopus
27562364 27562364 PRJNA946307_P_NODE_74764_length_197_cov_5.594595_g73890_i0 PRJNA946307 74764 197 5.594595 11.02135215 Pomatorhinus ruficollis 932028 Chordata Chordata 40.8 0.012   NR NXY38567.1 932028 g73890 i0 40 0.685279187817259 45 27 68.5 0 193 59 1 45 NXY38567.1 GLL9 protein [Pomatorhinus ruficollis] diamond 135 40.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Timaliidae Pomatorhinus Pomatorhinus ruficollis
27594258 27594258 PRJNA946307_P_NODE_161624_length_162_cov_0.920354_g160750_i0 PRJNA946307 161624 162 0.920354 1.49097348 Engystomops pustulosus 76066 Chordata Chordata 39.3 0.0402   NR KAG8541121.1 76066 g160750 i0 68.2 0.407407407407407 22 7 40.7 0 96 31 22 43 KAG8541121.1 hypothetical protein GDO81_029672 [Engystomops pustulosus] diamond 66 39.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
27689325 27689325 PRJNA946307_P_NODE_99904_length_184_cov_2.111111_g99030_i0 PRJNA946307 99904 184 2.111111 3.88444424 Phrynocephalus forsythii 171643 Chordata Chordata 41.2 0.0343   NR KAJ7310350.1 171643 g99030 i0 94.1 0.277173913043478 17 1 27.7 0 133 183 21 37 KAJ7310350.1 hypothetical protein JRQ81_007259 [Phrynocephalus forsythii] diamond 51 41.2 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Agamidae Phrynocephalus Phrynocephalus forsythii
27695864 27695864 PRJNA946307_P_NODE_79664_length_194_cov_3.172414_g78790_i0 PRJNA946307 79664 194 3.172414 6.15448316 Mammalia 40674 Chordata Chordata 48.1 1.38e-4   NR XP_045853368.1 9662 g78790 i0 46.3 1.22164948453608 41 22 63.4 0 191 69 100 140 XP_045853368.1 60S acidic ribosomal protein P1-like [Meles meles] diamond 237 48.5 0.991752577319588 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Meles Meles meles
27815428 27815428 PRJNA946307_P_NODE_82464_length_192_cov_2.643357_g81590_i0 PRJNA946307 82464 192 2.643357 5.07524544 Dasypus novemcinctus 9361 Chordata Chordata 44.3 0.00562   NR XP_004446998.1 9361 g81590 i0 41.8 0.859375 55 27 78.1 1 19 168 362 416 XP_004446998.1 dendrin [Dasypus novemcinctus] diamond 165 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Cingulata Dasypodidae Dasypus Dasypus novemcinctus
27815438 27815438 PRJNA946307_P_NODE_95544_length_186_cov_2.058394_g94670_i0 PRJNA946307 95544 186 2.058394 3.82861284 Crocuta crocuta 9678 Chordata Chordata 41.2 0.00844   NR KAF0877179.1 9678 g94670 i0 65.5 0.467741935483871 29 10 46.8 0 95 181 31 59 KAF0877179.1 LORF2 protein, partial [Crocuta crocuta] diamond 87 41.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Hyaenidae Crocuta Crocuta crocuta
28446797 28446797 PRJNA946307_P_NODE_144086_length_166_cov_1.666667_g143212_i0 PRJNA946307 144086 166 1.666667 2.76666722 Enhydra lutris kenyoni 391180 Chordata Chordata 42.7 0.0134   NR XP_022372638.1 391180 g143212 i0 46.7 0.813253012048193 45 21 75.9 1 139 14 2 46 XP_022372638.1 LOW QUALITY PROTEIN: mesothelin-like [Enhydra lutris kenyoni] diamond 135 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Enhydra Enhydra lutris
28636254 28636254 PRJNA946307_P_NODE_100947_length_184_cov_1.251852_g100073_i0 PRJNA946307 100947 184 1.251852 2.30340768 Engystomops pustulosus 76066 Chordata Chordata 47.4 3.35e-5   NR KAG8584541.1 76066 g100073 i0 53.8 0.847826086956522 52 24 84.8 0 11 166 1 52 KAG8584541.1 hypothetical protein GDO81_004655 [Engystomops pustulosus] diamond 156 47.4 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
28888572 28888572 PRJNA946307_P_NODE_135388_length_169_cov_0.866667_g134514_i0 PRJNA946307 135388 169 0.866667 1.46466723 Eubucco bourcierii 91767 Chordata Chordata 43.5 0.0074400000000000004   NR NXF94556.1 91767 g134514 i0 40.6 2.89349112426035 64 19 79.9 2 145 11 336 399 NXF94556.1 PRDM5 protein [Eubucco bourcierii] diamond 489 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Piciformes Ramphastidae Eubucco Eubucco bourcierii
29015264 29015264 PRJNA946307_P_NODE_163848_length_161_cov_3.258929_g162974_i0 PRJNA946307 163848 161 3.258929 5.24687569 Ciona intestinalis 7719 Chordata Chordata 42 0.0231   NR XP_002126864.1 7719 g162974 i0 54.3 0.652173913043478 35 16 65.2 0 18 122 359 393 XP_002126864.1 protein RCC2 homolog [Ciona intestinalis] diamond 105 42 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Cionidae Ciona Ciona intestinalis
29141450 29141450 PRJNA946307_P_NODE_139009_length_167_cov_2.966102_g138135_i0 PRJNA946307 139009 167 2.966102 4.95339034 Meles meles 9662 Chordata Chordata 41.2 0.0481   NR XP_045881491.1 9662 g138135 i0 58.3 0.646706586826347 36 14 62.9 1 61 165 307 342 XP_045881491.1 LOW QUALITY PROTEIN: uncharacterized protein LOC123954405 [Meles meles] diamond 108 41.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Meles Meles meles
29463269 29463269 PRJNA946307_P_NODE_126010_length_172_cov_3.073171_g125136_i0 PRJNA946307 126010 172 3.073171 5.28585412 Passeriformes 9126 Chordata Chordata 48.5 1.32e-4   NR XP_050835264.1 9135 g125136 i0 60 3.01744186046512 35 14 61 0 154 50 506 540 XP_050835264.1 2'-5'-oligoadenylate synthase 1-like isoform X1 [Serinus canaria] diamond 519 48.9 0.991820040899796 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Serinus Serinus canaria
30000649 30000649 PRJNA946307_P_NODE_105791_length_181_cov_3.583333_g104917_i0 PRJNA946307 105791 181 3.583333 6.48583273 Chordata 7711 Chordata Chordata 75.9 2.65e-14   NR NP_001083793.1 8355 g104917 i0 92.5 54.4309392265193 40 3 66.3 0 55 174 84 123 NP_001083793.1 protein arginine N-methyltransferase 1-A [Xenopus laevis] diamond 9852 76.3 0.99475753604194 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
30380023 30380023 PRJNA946307_P_NODE_106092_length_181_cov_2.840909_g105218_i0 PRJNA946307 106092 181 2.840909 5.14204529 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 85.5 2.67e-19   NR KFR01876.1 128390 g105218 i0 64.2 5.25414364640884 53 19 87.8 0 15 173 7 59 KFR01876.1 putative cytosolic iron-sulfur protein assembly protein CIAO1, partial [Nipponia nippon] diamond 951 85.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Pelecaniformes Threskiornithidae Nipponia Nipponia nippon
30727164 30727164 PRJNA946307_P_NODE_52674_length_210_cov_3.000000_g51800_i0 PRJNA946307 52674 210 3 6.3 Metazoa 33208 Chordata Chordata 49.3 1.23e-4   NR EMP34760.1 8469 g51800 i0 44.2 2.97142857142857 43 23 61.4 1 10 138 738 779 EMP34760.1 Multiple epidermal growth factor-like domains protein 10 [Chelonia mydas] diamond 624 49.7 0.991951710261569 Eukaryota Opisthokonta Metazoa Chordata   Testudines Cheloniidae Chelonia Chelonia mydas
30815272 30815272 PRJNA946307_P_NODE_149514_length_165_cov_0.896552_g148640_i0 PRJNA946307 149514 165 0.896552 1.4793108 Sousa chinensis 103600 Chordata Chordata 50.1 3.48e-5   NR TEA38950.1 103600 g148640 i0 57.5 0.727272727272727 40 17 72.7 0 129 10 443 482 TEA38950.1 hypothetical protein DBR06_SOUSAS1710029 [Sousa chinensis] diamond 120 50.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Sousa Sousa chinensis
31162540 31162540 PRJNA946307_P_NODE_119355_length_175_cov_2.809524_g118481_i0 PRJNA946307 119355 175 2.809524 4.916667 Felis catus 9685 Chordata Chordata 47.8 2.52e-4   NR XP_044894023.1 9685 g118481 i0 83.3 0.411428571428571 24 4 41.1 0 124 53 222 245 XP_044894023.1 basic salivary proline-rich protein 3-like [Felis catus] diamond 72 47.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Felis Felis catus
31447487 31447487 PRJNA946307_P_NODE_142636_length_166_cov_4.811966_g141762_i0 PRJNA946307 142636 166 4.811966 7.98786356 Staurois parvus 386267 Chordata Chordata 53.1 1.49e-7   NR CAI9540006.1 386267 g141762 i0 61.7 0.849397590361446 47 18 84.9 0 21 161 1 47 CAI9540006.1 unnamed protein product, partial [Staurois parvus] diamond 141 53.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
31447508 31447508 PRJNA946307_P_NODE_167416_length_158_cov_3.146789_g166542_i0 PRJNA946307 167416 158 3.146789 4.97192662 Neopelma chrysocephalum 114329 Chordata Chordata 41.2 0.042   NR XP_027558588.1 114329 g166542 i0 45.5 0.835443037974684 44 20 79.7 2 135 10 845 886 XP_027558588.1 agrin [Neopelma chrysocephalum] diamond 132 41.2 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Pipridae Neopelma Neopelma chrysocephalum
31826825 31826825 PRJNA946307_P_NODE_119977_length_175_cov_1.960317_g119103_i0 PRJNA946307 119977 175 1.960317 3.43055475 Eschrichtius robustus 9764 Chordata Chordata 67.8 2.19e-11   NR KAJ8791820.1 9764 g119103 i0 66.7 0.771428571428571 45 15 77.1 0 148 14 186 230 KAJ8791820.1 hypothetical protein J1605_020542 [Eschrichtius robustus] diamond 135 67.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
31890260 31890260 PRJNA946307_P_NODE_172737_length_153_cov_3.480769_g171863_i0 PRJNA946307 172737 153 3.480769 5.32557657 Branchiostoma belcheri 7741 Chordata Chordata 50.8 1.48e-5   NR KAI8493380.1 7741 g171863 i0 71.4 0.549019607843137 28 8 54.9 0 152 69 3 30 KAI8493380.1 hypothetical protein Bbelb_287770 [Branchiostoma belcheri] diamond 84 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
32111813 32111813 PRJNA946307_P_NODE_150918_length_164_cov_4.069565_g150044_i0 PRJNA946307 150918 164 4.069565 6.6740866 Sus scrofa 9823 Chordata Chordata 62 2.02e-9   NR XP_020946894.1 9823 g150044 i0 63.8 1.75609756097561 47 17 86 0 22 162 690 736 XP_020946894.1 collagen alpha-2(I) chain-like [Sus scrofa] diamond 288 62 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
32206762 32206762 PRJNA946307_P_NODE_150998_length_164_cov_3.713043_g150124_i0 PRJNA946307 150998 164 3.713043 6.08939052 Bos mutus 72004 Chordata Chordata 52 6.89e-6   NR MXQ88326.1 72004 g150124 i0 96.3 0.49390243902439 27 1 49.4 0 83 163 372 398 MXQ88326.1 hypothetical protein [Bos mutus] diamond 81 52 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;