RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA946307" and tax_phylum = "Candidatus Fervidibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fervidibacterota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA946307 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27373386 27373386 PRJNA946307_P_NODE_173063_length_153_cov_2.740385_g172189_i0 PRJNA946307 173063 153 2.740385 4.19278905 Candidatus Fervidibacter sp. 3100871 Bacteria Bacteria 94.4 9.1e-22   NR MFA0775551.1 3100871 g172189 i0 93.8 0.941176470588235 48 3 94.1 0 6 149 182 229 MFA0775551.1 hypothetical protein [Candidatus Fervidibacter sp.] diamond 144 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sp.
29905903 29905903 PRJNA946307_P_NODE_106171_length_181_cov_2.712121_g105297_i0 PRJNA946307 106171 181 2.712121 4.90893901 Pseudomonadati 3379134 Bacteria Bacteria 44.7 0.00217   NR WP_259096678.1 1448929 g105297 i0 36.5 2.65193370165746 52 30 82.9 2 25 174 52 102 WP_259096678.1 transcription termination/antitermination protein NusG [Candidatus Fervidibacter sacchari] diamond 480 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sacchari
30625538 30625538 PRJNA946307_P_NODE_122873_length_174_cov_1.544000_g121999_i0 PRJNA946307 122873 174 1.544 2.68656 Candidatus Fervidibacter sp. 3100871 Bacteria Bacteria 126 3.9699999999999996e-32   NR MFA0732144.1 3100871 g121999 i0 98.1 1.82758620689655 53 1 91.4 0 3 161 154 206 MFA0732144.1 hypothetical protein [Candidatus Fervidibacter sp.] diamond 318 126 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sp.
31447481 31447481 PRJNA946307_P_NODE_131016_length_170_cov_2.355372_g130142_i0 PRJNA946307 131016 170 2.355372 4.0041324 Candidatus Fervidibacterota bacterium 2080304 Bacteria Bacteria 55.8 5.2100000000000003e-08   NR MFA0761756.1 2080304 g130142 i0 51 0.864705882352941 49 24 86.5 0 11 157 2 50 MFA0761756.1 hypothetical protein [Candidatus Fervidibacterota bacterium] diamond 147 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota         Candidatus Fervidibacterota bacterium
31890207 31890207 PRJNA946307_P_NODE_122377_length_174_cov_1.616000_g121503_i0 PRJNA946307 122377 174 1.616 2.81184 Candidatus Fervidibacter sp. 3100871 Bacteria Bacteria 77.8 6.26e-15   NR MFA0733970.1 3100871 g121503 i0 64.7 2.6551724137931 51 18 87.9 0 8 160 194 244 MFA0733970.1 hypothetical protein [Candidatus Fervidibacter sp.] diamond 462 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;