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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA946307" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA946307 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26835647 26835647 PRJNA946307_P_NODE_131821_length_170_cov_1.603306_g130947_i0 PRJNA946307 131821 170 1.603306 2.7256202 Fistulifera solaris 1519565 SAR_Eukaryotes SAR_Eukaryotes 46.6 6e-4   NR GAX18564.1 1519565 g130947 i0 72.7 0.582352941176471 33 9 58.2 0 15 113 328 360 GAX18564.1 hypothetical protein FisN_10Hh235 [Fistulifera solaris] diamond 99 46.6 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Fistulifera Fistulifera solaris
28099212 28099212 PRJNA946307_P_NODE_124165_length_173_cov_2.306452_g123291_i0 PRJNA946307 124165 173 2.306452 3.99016196 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 89 3.71e-19   NR KAI2503397.1 210448 g123291 i0 71.9 0.988439306358382 57 16 98.8 0 171 1 245 301 KAI2503397.1 ribosomal eS4-like protein [Fragilaria crotonensis] diamond 171 89 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
28131055 28131055 PRJNA946307_P_NODE_163185_length_162_cov_0.902655_g162311_i0 PRJNA946307 163185 162 0.902655 1.4623011 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 48.5 3.68e-5   NR KAI2502639.1 210448 g162311 i0 57.1 0.777777777777778 42 18 77.8 0 3 128 1 42 KAI2502639.1 hypothetical protein MHU86_11833 [Fragilaria crotonensis] diamond 126 48.5 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
29558265 29558265 PRJNA946307_P_NODE_103790_length_182_cov_2.842105_g102916_i0 PRJNA946307 103790 182 2.842105 5.1726311 root 1 Root_unresolved Root_unresolved 44.3 0.00469   NR KAG7363817.1 303405 g102916 i0 40.4 2.86813186813187 52 31 85.7 0 169 14 257 308 KAG7363817.1 tetratricopeptide repeat protein [Nitzschia inconspicua] diamond 522 44.3 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
30088607 30088607 PRJNA946307_P_NODE_63472_length_201_cov_3.598684_g62598_i0 PRJNA946307 63472 201 3.598684 7.23335484 Discostella pseudostelligera 259834 SAR_Eukaryotes SAR_Eukaryotes 54.7 1.28e-6   NR KAL3759471.1 259834 g62598 i0 47.9 1.08955223880597 73 27 92.5 2 2 187 83 155 KAL3759471.1 hypothetical protein ACHAWU_000770 [Discostella pseudostelligera] diamond 219 54.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Discostella Discostella pseudostelligera
30095175 30095175 PRJNA946307_P_NODE_38112_length_215_cov_3.313253_g37238_i0 PRJNA946307 38112 215 3.313253 7.12349395 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00208   NR CAJ1942384.1 2856 g37238 i0 59.5 4.50697674418605 42 9 58.6 1 173 48 158 191 CAJ1942384.1 unnamed protein product [Cylindrotheca closterium] diamond 969 45.8 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
30183366 30183366 PRJNA946307_P_NODE_143112_length_166_cov_2.641026_g142238_i0 PRJNA946307 143112 166 2.641026 4.3841031600000004 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 57 1.18e-7   NR KAL3939248.1 3061772 g142238 i0 51 3.5421686746988 49 24 88.6 0 18 164 367 415 KAL3939248.1 MAG: hypothetical protein SGBAC_005998 [Bacillariaceae sp.] diamond 588 57 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.
31384308 31384308 PRJNA946307_P_NODE_104236_length_182_cov_2.150376_g103362_i0 PRJNA946307 104236 182 2.150376 3.91368432 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 93.6 2.03e-20   NR KAK1737608.1 267567 g103362 i0 71.4 12.0494505494505 56 16 92.3 0 2 169 425 480 KAK1737608.1 lysine-tRNA ligase [Skeletonema marinoi] diamond 2193 93.6 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
31732068 31732068 PRJNA946307_P_NODE_54657_length_210_cov_2.906832_g53783_i0 PRJNA946307 54657 210 2.906832 6.1043472 Pseudo-nitzschia multistriata 183589 SAR_Eukaryotes SAR_Eukaryotes 62.8 2.11e-9   NR VEU33509.1 183589 g53783 i0 44.8 1.24285714285714 87 26 92.9 1 1 195 29 115 VEU33509.1 unnamed protein product [Pseudo-nitzschia multistriata] diamond 261 62.8 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia multistriata
31858570 31858570 PRJNA946307_P_NODE_156537_length_163_cov_1.701754_g155663_i0 PRJNA946307 156537 163 1.701754 2.77385902 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 48.9 8.41e-5   NR KAI2511223.1 210448 g155663 i0 48.9 0.865030674846626 47 24 86.5 0 5 145 284 330 KAI2511223.1 Plant transposon protein [Fragilaria crotonensis] diamond 141 48.9 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
32680488 32680488 PRJNA946307_P_NODE_134520_length_169_cov_1.583333_g133646_i0 PRJNA946307 134520 169 1.583333 2.67583277 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 67.8 2.01e-11   NR GFH61111.1 426638 g133646 i0 68.6 3.71005917159763 51 16 90.5 0 168 16 169 219 GFH61111.1 hypothetical protein CTEN210_17587 [Chaetoceros tenuissimus] diamond 627 67.8 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
32876319 32876319 PRJNA946307_P_NODE_99800_length_184_cov_2.125926_g98926_i0 PRJNA946307 99800 184 2.125926 3.91170384 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 79.7 1.59e-15   NR CAJ1966107.1 2856 g98926 i0 61.4 4.58152173913043 57 22 92.9 0 13 183 925 981 CAJ1966107.1 unnamed protein product [Cylindrotheca closterium] diamond 843 79.7 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;