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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA946307" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA946307 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9854562 9854562 PRJNA946307_P_NODE_161008_length_162_cov_1.707965_g160134_i0 PRJNA946307 161008 162 1.707965 2.7669033 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 82.4 6.59e-17   NR HEX8550445.1 2800791 g160134 i0 75.5 0.907407407407407 49 12 90.7 0 147 1 212 260 HEX8550445.1 GNAT family N-acetyltransferase [Abditibacteriaceae bacterium] diamond 147 82.4 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
26613685 26613685 PRJNA946307_P_NODE_150321_length_165_cov_0.879310_g149447_i0 PRJNA946307 150321 165 0.87931 1.4508615 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 41.6 0.0347   NR HEX8550686.1 2800791 g149447 i0 45.7 0.836363636363636 46 25 83.6 0 19 156 176 221 HEX8550686.1 O-antigen ligase family protein [Abditibacteriaceae bacterium] diamond 138 41.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27057061 27057061 PRJNA946307_P_NODE_113962_length_178_cov_1.496124_g113088_i0 PRJNA946307 113962 178 1.496124 2.66310072 Abditibacteriota bacterium 2783868 Bacteria Bacteria 72 7.45e-13   NR MDF2441487.1 2783868 g113088 i0 60.7 0.943820224719101 56 22 94.4 0 178 11 269 324 MDF2441487.1 polysaccharide biosynthesis transport protein [Abditibacteriota bacterium] diamond 168 72 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
27063704 27063704 PRJNA946307_P_NODE_51942_length_210_cov_3.254658_g51068_i0 PRJNA946307 51942 210 3.254658 6.8347818 Pseudomonadati 3379134 Bacteria Bacteria 60.1 1.81e-8   NR HVF09524.1 2800791 g51068 i0 84.8 2.27142857142857 33 5 47.1 0 111 209 323 355 HVF09524.1 DUF1800 domain-containing protein [Abditibacteriaceae bacterium] diamond 477 60.1 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27214845 27214845 PRJNA946307_P_NODE_145842_length_166_cov_0.871795_g144968_i0 PRJNA946307 145842 166 0.871795 1.4471797 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 101 3.1e-23   NR HVF10891.1 2800791 g144968 i0 89.8 0.885542168674699 49 5 88.6 0 12 158 976 1024 HVF10891.1 PDZ domain-containing protein [Abditibacteriaceae bacterium] diamond 147 101 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27436481 27436481 PRJNA946307_P_NODE_144143_length_166_cov_1.658120_g143269_i0 PRJNA946307 144143 166 1.65812 2.7524792 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 42.4 0.0185   NR HEX8237450.1 2800791 g143269 i0 57.7 0.939759036144578 52 18 94 2 165 10 569 616 HEX8237450.1 tetratricopeptide repeat protein [Abditibacteriaceae bacterium] diamond 156 42.4 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27594259 27594259 PRJNA946307_P_NODE_162204_length_162_cov_0.902655_g161330_i0 PRJNA946307 162204 162 0.902655 1.4623011 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 86.7 2.08e-18   NR HEX8235257.1 2800791 g161330 i0 77.1 0.888888888888889 48 11 88.9 0 146 3 152 199 HEX8235257.1 LacI family DNA-binding transcriptional regulator [Abditibacteriaceae bacterium] diamond 144 86.7 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
28036340 28036340 PRJNA946307_P_NODE_78265_length_195_cov_3.760274_g77391_i0 PRJNA946307 78265 195 3.760274 7.3325343 Abditibacterium sp. 2109264 Bacteria Bacteria 53.5 9.92e-7   NR HEX8463749.1 2109264 g77391 i0 48.8 0.661538461538462 43 22 66.2 0 158 30 106 148 HEX8463749.1 hypothetical protein [Abditibacterium sp.] diamond 129 53.5 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
28604580 28604580 PRJNA946307_P_NODE_76307_length_196_cov_5.190476_g75433_i0 PRJNA946307 76307 196 5.190476 10.17333296 Abditibacteriota bacterium 2783868 Bacteria Bacteria 51.2 1.5e-5   NR MDF2439746.1 2783868 g75433 i0 70 1.28571428571429 30 9 45.9 0 102 191 1 30 MDF2439746.1 phosphoribosylaminoimidazole-succinocarboxamide synthase [Abditibacteriota bacterium] diamond 252 51.2 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
29393928 29393928 PRJNA946307_P_NODE_154829_length_164_cov_0.886957_g153955_i0 PRJNA946307 154829 164 0.886957 1.45460948 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 68.2 1.27e-11   NR HEY0075727.1 2800791 g153955 i0 69.4 0.896341463414634 49 15 89.6 0 162 16 170 218 HEY0075727.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Abditibacteriaceae bacterium] diamond 147 68.2 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29488404 29488404 PRJNA946307_P_NODE_22830_length_268_cov_3.671233_g21956_i0 PRJNA946307 22830 268 3.671233 9.83890444 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 140 2.22e-36   NR HEX8550833.1 2800791 g21956 i0 76.1 0.985074626865672 88 19 98.5 1 266 3 107 192 HEX8550833.1 TAT-variant-translocated molybdopterin oxidoreductase [Abditibacteriaceae bacterium] diamond 264 140 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29520063 29520063 PRJNA946307_P_NODE_150310_length_165_cov_0.879310_g149436_i0 PRJNA946307 150310 165 0.87931 1.4508615 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 54.7 7.69e-7   NR HEY0075478.1 2800791 g149436 i0 65.8 0.690909090909091 38 13 69.1 0 5 118 385 422 HEY0075478.1 ABC transporter permease subunit [Abditibacteriaceae bacterium] diamond 114 54.7 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
30783760 30783760 PRJNA946307_P_NODE_70614_length_199_cov_3.106667_g69740_i0 PRJNA946307 70614 199 3.106667 6.18226733 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 65.1 9.73e-11   NR HEX8551324.1 2800791 g69740 i0 76.5 0.512562814070352 34 8 51.3 0 199 98 72 105 HEX8551324.1 DUF3431 domain-containing protein [Abditibacteriaceae bacterium] diamond 102 65.1 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
30815257 30815257 PRJNA946307_P_NODE_134454_length_169_cov_1.608333_g133580_i0 PRJNA946307 134454 169 1.608333 2.71808277 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 66.6 3.52e-12   NR HEX8234565.1 2800791 g133580 i0 77.5 0.710059171597633 40 8 69.2 1 10 126 63 102 HEX8234565.1 hypothetical protein [Abditibacteriaceae bacterium] diamond 120 66.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31542522 31542522 PRJNA946307_P_NODE_74716_length_197_cov_6.202703_g73842_i0 PRJNA946307 74716 197 6.202703 12.21932491 Abditibacteriota bacterium 2783868 Bacteria Bacteria 55.5 8.45e-8   NR MDF2439457.1 2783868 g73842 i0 80 0.456852791878173 30 6 45.7 0 105 16 75 104 MDF2439457.1 GntR family transcriptional regulator [Abditibacteriota bacterium] diamond 90 55.5 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
31574141 31574141 PRJNA946307_P_NODE_135196_length_169_cov_0.866667_g134322_i0 PRJNA946307 135196 169 0.866667 1.46466723 Abditibacterium sp. 2109264 Bacteria Bacteria 69.7 4.27e-12   NR HEX8465379.1 2109264 g134322 i0 61.2 0.869822485207101 49 19 87 0 162 16 462 510 HEX8465379.1 hypothetical protein [Abditibacterium sp.] diamond 147 69.7 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
31858547 31858547 PRJNA946307_P_NODE_124857_length_173_cov_1.572581_g123983_i0 PRJNA946307 124857 173 1.572581 2.72056513 Abditibacterium utsteinense 1960156 Bacteria Bacteria 51.2 1.04e-5   NR WP_157947611.1 1960156 g123983 i0 64.1 0.676300578034682 39 9 67.6 1 41 157 173 206 WP_157947611.1 DUF1559 domain-containing protein [Abditibacterium utsteinense] diamond 117 51.2 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
32333623 32333623 PRJNA946307_P_NODE_26339_length_251_cov_3.678218_g25465_i0 PRJNA946307 26339 251 3.678218 9.23232718 Abditibacteriota bacterium 2783868 Bacteria Bacteria 75.9 4.08e-15   NR BCM93933.1 2783868 g25465 i0 77.8 0.537848605577689 45 10 53.8 0 15 149 111 155 BCM93933.1 hypothetical protein IAD21_05828 [Abditibacteriota bacterium] diamond 135 75.9 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
32617846 32617846 PRJNA946307_P_NODE_78860_length_195_cov_2.212329_g77986_i0 PRJNA946307 78860 195 2.212329 4.31404155 Abditibacteriota bacterium 2783868 Bacteria Bacteria 94.4 1.28e-20   NR MDF2440115.1 2783868 g77986 i0 93.8 0.738461538461539 48 3 73.8 0 193 50 422 469 MDF2440115.1 ATP-binding cassette, subfamily putative efflux pump [Abditibacteriota bacterium] diamond 144 94.4 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
32712268 32712268 PRJNA946307_P_NODE_60560_length_206_cov_2.802548_g59686_i0 PRJNA946307 60560 206 2.802548 5.77324888 Abditibacteriota bacterium 2783868 Bacteria Bacteria 46.2 0.00124   NR MDF2439402.1 2783868 g59686 i0 100 0.320388349514563 22 0 32 0 2 67 239 260 MDF2439402.1 phospholipid/cholesterol/gamma-HCH transport system permease protein [Abditibacteriota bacterium] diamond 66 46.2 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;