RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA944406" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA944406 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28383340 28383340 PRJNA944406_P_NODE_38966_length_273_cov_1.920000_g38007_i0 PRJNA944406 38966 273 1.92 5.2416 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 52.4 2.18e-5   NR HZW91738.1 3069296 g38007 i0 45.9 0.934065934065934 85 39 91.2 2 272 24 265 344 HZW91738.1 serine/threonine-protein kinase [Candidatus Eremiobacteraceae bacterium] diamond 255 52.4 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium
31068181 31068181 PRJNA944406_P_NODE_77955_length_248_cov_0.880000_g76996_i0 PRJNA944406 77955 248 0.88 2.1824 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 112 1.77e-29   NR HZA37710.1 2952909 g76996 i0 87.1 0.75 62 8 75 0 247 62 107 168 HZA37710.1 hypothetical protein [Candidatus Baltobacteraceae bacterium] diamond 186 112 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;