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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA944406" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA944406 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
924675 924675 PRJNA944406_P_NODE_55141_length_258_cov_1.664865_g54182_i0 PRJNA944406 55141 258 1.664865 4.2953517 Fibrobacteria bacterium 2725311 Bacteria Bacteria 126 4.939999999999998e-35   NR MCD6023900.1 2725311 g54182 i0 91.5 0.825581395348837 71 6 82.6 0 44 256 1 71 MCD6023900.1 transcription elongation factor GreA [Fibrobacteria bacterium] diamond 213 126 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
2200016 2200016 PRJNA944406_P_NODE_51142_length_262_cov_1.560847_g50183_i0 PRJNA944406 51142 262 1.560847 4.08941914 Fibrobacteria bacterium 2725311 Bacteria Bacteria 163 1.41e-48   NR MCD6024501.1 2725311 g50183 i0 95.3 0.984732824427481 86 4 98.5 0 260 3 125 210 MCD6024501.1 MotA/TolQ/ExbB proton channel [Fibrobacteria bacterium] diamond 258 163 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
3475306 3475306 PRJNA944406_P_NODE_44383_length_268_cov_1.620513_g43424_i0 PRJNA944406 44383 268 1.620513 4.34297484 Fibrobacteria bacterium 2725311 Bacteria Bacteria 163 9.55e-49   NR MCD6024029.1 2725311 g43424 i0 84.1 0.985074626865672 88 14 98.5 0 266 3 6 93 MCD6024029.1 Redoxin domain protein [Fibrobacteria bacterium] diamond 264 163 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
27183194 27183194 PRJNA944406_P_NODE_42222_length_270_cov_1.954315_g41263_i0 PRJNA944406 42222 270 1.954315 5.2766505 Fibrobacteria bacterium 2725311 Bacteria Bacteria 71.2 2.62e-12   NR MCD6023125.1 2725311 g41263 i0 40.9 1.03333333333333 93 49 96.7 2 269 9 83 175 MCD6023125.1 hypothetical protein [Fibrobacteria bacterium] diamond 279 71.2 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
27689139 27689139 PRJNA944406_P_NODE_34444_length_278_cov_1.185366_g33485_i0 PRJNA944406 34444 278 1.185366 3.29531748 Fibrobacteria bacterium 2725311 Bacteria Bacteria 143 8.09e-40   NR MCD6024679.1 2725311 g33485 i0 84.1 0.884892086330935 82 13 88.5 0 33 278 61 142 MCD6024679.1 scpB [Fibrobacteria bacterium] diamond 246 143 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
27815280 27815280 PRJNA944406_P_NODE_59984_length_254_cov_1.303867_g59025_i0 PRJNA944406 59984 254 1.303867 3.31182218 Fibrobacteria bacterium 2725311 Bacteria Bacteria 156 3.15e-42   NR MEO6094526.1 2725311 g59025 i0 92.9 0.992125984251969 84 6 99.2 0 254 3 644 727 MEO6094526.1 response regulator [Fibrobacteria bacterium] diamond 252 156 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
30183313 30183313 PRJNA944406_P_NODE_78712_length_248_cov_0.880000_g77753_i0 PRJNA944406 78712 248 0.88 2.1824 Fibrobacterota bacterium 2052160 Bacteria Bacteria 124 3.4299999999999996e-31   NR MEK7392898.1 2052160 g77753 i0 70 3.91935483870968 80 24 96.8 0 8 247 166 245 MEK7392898.1 class I adenylate-forming enzyme family protein [Fibrobacterota bacterium] diamond 972 124 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
31162472 31162472 PRJNA944406_P_NODE_22215_length_289_cov_2.314815_g21256_i0 PRJNA944406 22215 289 2.314815 6.68981535 Fibrobacteria bacterium 2725311 Bacteria Bacteria 109 1.94e-25   NR HQF56504.1 2725311 g21256 i0 98 0.519031141868512 50 1 51.9 0 1 150 643 692 HQF56504.1 ATP-dependent RNA helicase HrpA [Fibrobacteria bacterium] diamond 150 109 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
31574072 31574072 PRJNA944406_P_NODE_49836_length_263_cov_1.621053_g48877_i0 PRJNA944406 49836 263 1.621053 4.26336939 Fibrobacteria bacterium 2725311 Bacteria Bacteria 145 3.52e-42   NR HEX2613169.1 2725311 g48877 i0 77 1.98479087452471 87 20 99.2 0 262 2 38 124 HEX2613169.1 elongation factor P [Fibrobacteria bacterium] diamond 522 145 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32333553 32333553 PRJNA944406_P_NODE_93699_length_244_cov_1.467836_g92740_i0 PRJNA944406 93699 244 1.467836 3.58151984 Fibrobacteria bacterium 2725311 Bacteria Bacteria 132 2.5e-34   NR MCD6024489.1 2725311 g92740 i0 84.1 1.00819672131148 82 12 99.6 1 1 243 71 152 MCD6024489.1 microcin-processing peptidase 2 [Fibrobacteria bacterium] diamond 246 132 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32554996 32554996 PRJNA944406_P_NODE_28959_length_283_cov_1.309524_g28000_i0 PRJNA944406 28959 283 1.309524 3.70595292 Fibrobacteria bacterium 2725311 Bacteria Bacteria 173 2.9499999999999995e-48   NR MEO6096566.1 2725311 g28000 i0 80.6 0.985865724381625 93 18 98.6 0 3 281 557 649 MEO6096566.1 bi-domain-containing oxidoreductase [Fibrobacteria bacterium] diamond 279 173 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;