RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA944406" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA944406 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26993413 26993413 PRJNA944406_P_NODE_37542_length_275_cov_1.242574_g36583_i0 PRJNA944406 37542 275 1.242574 3.4170785 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 102 3.74e-26   NR MES1913934.1 1215613 g36583 i0 70.4 0.774545454545455 71 21 77.5 0 274 62 16 86 MES1913934.1 hypothetical protein [Cercozoa sp. M6MM] diamond 213 102 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30530728 30530728 PRJNA944406_P_NODE_11533_length_369_cov_1.091216_g10574_i0 PRJNA944406 11533 369 1.091216 4.02658704 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 70.9 1.98e-11   NR MES1909771.1 1215613 g10574 i0 49.4 2.08130081300813 81 41 65.9 0 364 122 353 433 MES1909771.1 hypothetical protein [Cercozoa sp. M6MM] diamond 768 70.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;