RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA944406" and tax_phylum = "Abditibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 33 ✖

tax_kingdom 1

bioproject 1

  • PRJNA944406 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12738991 12738991 PRJNA944406_P_NODE_88070_length_246_cov_0.890173_g87111_i0 PRJNA944406 88070 246 0.890173 2.18982558 Abditibacterium sp. 2109264 Bacteria Bacteria 145 3.78e-40   NR HEX9997152.1 2109264 g87111 i0 88.9 1.97560975609756 81 9 98.8 0 3 245 49 129 HEX9997152.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Abditibacterium sp.] diamond 486 145 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
14013253 14013253 PRJNA944406_P_NODE_101611_length_242_cov_2.810651_g100652_i0 PRJNA944406 101611 242 2.810651 6.80177542 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 83.6 1.52e-16   NR HEX8552193.1 2800791 g100652 i0 85.1 1.16528925619835 47 7 58.3 0 102 242 1 47 HEX8552193.1 alpha-glucan family phosphorylase [Abditibacteriaceae bacterium] diamond 282 83.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
22601540 22601540 PRJNA944406_P_NODE_36558_length_276_cov_1.211823_g35599_i0 PRJNA944406 36558 276 1.211823 3.34463148 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 133 6.86e-36   NR HEX8551362.1 2800791 g35599 i0 70.4 1.77173913043478 81 24 88 0 4 246 213 293 HEX8551362.1 TIGR00730 family Rossman fold protein [Abditibacteriaceae bacterium] diamond 489 133 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
25150737 25150737 PRJNA944406_P_NODE_41240_length_271_cov_1.560606_g40281_i0 PRJNA944406 41240 271 1.560606 4.22924226 Abditibacterium 2109263 Bacteria Bacteria 163 1.3e-49   NR WP_105483736.1 1960156 g40281 i0 91 4.92619926199262 89 8 98.5 0 269 3 4 92 WP_105483736.1 50S ribosomal protein L11 [Abditibacterium utsteinense] diamond 1335 164 0.99390243902439 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
26835614 26835614 PRJNA944406_P_NODE_98841_length_243_cov_0.905882_g97882_i0 PRJNA944406 98841 243 0.905882 2.20129326 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 76.3 3.61e-14   NR HEX8551418.1 2800791 g97882 i0 49.4 1.96296296296296 79 40 97.5 0 2 238 148 226 HEX8551418.1 prepilin peptidase [Abditibacteriaceae bacterium] diamond 477 76.3 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27183231 27183231 PRJNA944406_P_NODE_84442_length_246_cov_1.780347_g83483_i0 PRJNA944406 84442 246 1.780347 4.37965362 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 125 8.559999999999998e-32   NR HEX8235129.1 2800791 g83483 i0 84 0.98780487804878 81 13 98.8 0 2 244 87 167 HEX8235129.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB [Abditibacteriaceae bacterium] diamond 243 125 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27972959 27972959 PRJNA944406_P_NODE_62625_length_251_cov_1.707865_g61666_i0 PRJNA944406 62625 251 1.707865 4.28674115 Abditibacterium utsteinense 1960156 Bacteria Bacteria 127 2.2299999999999998e-32   NR WP_105483677.1 1960156 g61666 i0 79.3 1.9601593625498 82 17 98 0 250 5 59 140 WP_105483677.1 argininosuccinate lyase [Abditibacterium utsteinense] diamond 492 127 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
28036186 28036186 PRJNA944406_P_NODE_64705_length_251_cov_0.865169_g63746_i0 PRJNA944406 64705 251 0.865169 2.17157419 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 77.8 4.93e-15   NR HEY0073076.1 2800791 g63746 i0 56 1.00398406374502 84 35 99.2 2 2 250 21 103 HEY0073076.1 succinate dehydrogenase cytochrome b subunit [Abditibacteriaceae bacterium] diamond 252 77.8 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
28193760 28193760 PRJNA944406_P_NODE_67946_length_250_cov_0.870056_g66987_i0 PRJNA944406 67946 250 0.870056 2.17514 Abditibacterium sp. 2109264 Bacteria Bacteria 149 5.229999999999998e-43   NR HEX8464576.1 2109264 g66987 i0 89 0.984 82 9 98.4 0 3 248 132 213 HEX8464576.1 hypothetical protein [Abditibacterium sp.] diamond 246 149 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
28231993 28231993 PRJNA944406_P_NODE_79866_length_247_cov_2.356322_g78907_i0 PRJNA944406 79866 247 2.356322 5.82011534 Abditibacterium 2109263 Bacteria Bacteria 135 9.73e-35   NR WP_106380971.1 1960156 g78907 i0 79.3 2.98785425101215 82 17 99.6 0 1 246 220 301 WP_106380971.1 DNA mismatch repair protein MutS [Abditibacterium utsteinense] diamond 738 136 0.992647058823529 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
28288483 28288483 PRJNA944406_P_NODE_31526_length_280_cov_2.178744_g30567_i0 PRJNA944406 31526 280 2.178744 6.1004832 Abditibacterium sp. 2109264 Bacteria Bacteria 148 6.3e-41   NR HEX8465567.1 2109264 g30567 i0 80.4 2.95714285714286 92 18 98.6 0 278 3 169 260 HEX8465567.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Abditibacterium sp.] diamond 828 148 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
28326842 28326842 PRJNA944406_P_NODE_58406_length_255_cov_1.692308_g57447_i0 PRJNA944406 58406 255 1.692308 4.3153854 Abditibacterium 2109263 Bacteria Bacteria 99.4 5.43e-22   NR WP_105482120.1 1960156 g57447 i0 60 3 85 34 100 0 255 1 266 350 WP_105482120.1 glycosyltransferase family 4 protein [Abditibacterium utsteinense] diamond 765 99.8 0.995991983967936 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
28699281 28699281 PRJNA944406_P_NODE_23387_length_288_cov_1.655814_g22428_i0 PRJNA944406 23387 288 1.655814 4.76874432 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 116 1.11e-28   NR MBV9864200.1 2800791 g22428 i0 72.4 2.58333333333333 76 21 79.2 0 61 288 317 392 MBV9864200.1 exo-alpha-sialidase [Abditibacteriaceae bacterium] diamond 744 116 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
28730761 28730761 PRJNA944406_P_NODE_55747_length_258_cov_1.286486_g54788_i0 PRJNA944406 55747 258 1.286486 3.31913388 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 102 5.51e-26   NR MBV9467653.1 2800791 g54788 i0 59.5 2.81395348837209 79 31 91.9 1 3 239 32 109 MBV9467653.1 hypothetical protein [Abditibacteriaceae bacterium] diamond 726 102 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29109733 29109733 PRJNA944406_P_NODE_79528_length_248_cov_0.880000_g78569_i0 PRJNA944406 79528 248 0.88 2.1824 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 105 2.36e-24   NR HEX8552910.1 2800791 g78569 i0 65.4 0.979838709677419 81 28 98 0 247 5 138 218 HEX8552910.1 APC family permease [Abditibacteriaceae bacterium] diamond 243 105 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29172921 29172921 PRJNA944406_P_NODE_46029_length_267_cov_1.314433_g45070_i0 PRJNA944406 46029 267 1.314433 3.50953611 Abditibacterium sp. 2109264 Bacteria Bacteria 101 5.94e-24   NR HEX9997131.1 2109264 g45070 i0 58.4 1 89 37 100 0 1 267 108 196 HEX9997131.1 DUF1844 domain-containing protein [Abditibacterium sp.] diamond 267 101 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
29488259 29488259 PRJNA944406_P_NODE_106310_length_241_cov_1.833333_g105351_i0 PRJNA944406 106310 241 1.833333 4.41833253 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 68.6 3.03e-11   NR MBV9867859.1 2800791 g105351 i0 51.4 0.921161825726141 74 36 92.1 0 1 222 715 788 MBV9867859.1 tetratricopeptide repeat protein [Abditibacteriaceae bacterium] diamond 222 68.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
30025502 30025502 PRJNA944406_P_NODE_63791_length_251_cov_0.865169_g62832_i0 PRJNA944406 63791 251 0.865169 2.17157419 Abditibacterium sp. 2109264 Bacteria Bacteria 125 7.63e-32   NR HEX9997089.1 2109264 g62832 i0 63.9 0.99203187250996006 83 30 99.2 0 251 3 346 428 HEX9997089.1 hypothetical protein [Abditibacterium sp.] diamond 249 125 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
30562155 30562155 PRJNA944406_P_NODE_100733_length_243_cov_0.905882_g99774_i0 PRJNA944406 100733 243 0.905882 2.20129326 Abditibacterium sp. 2109264 Bacteria Bacteria 108 1.83e-25   NR HEX8463040.1 2109264 g99774 i0 68.4 0.975308641975309 79 25 97.5 0 239 3 250 328 HEX8463040.1 glycoside hydrolase [Abditibacterium sp.] diamond 237 108 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
30720333 30720333 PRJNA944406_P_NODE_54854_length_258_cov_3.113514_g53895_i0 PRJNA944406 54854 258 3.113514 8.03286612 Abditibacteriota bacterium 2783868 Bacteria Bacteria 85.5 6.26e-19   NR MDF2440096.1 2783868 g53895 i0 56.1 1.94186046511628 82 35 94.2 1 15 257 1 82 MDF2440096.1 hypothetical protein [Abditibacteriota bacterium] diamond 501 85.5 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
30973343 30973343 PRJNA944406_P_NODE_92354_length_245_cov_0.895349_g91395_i0 PRJNA944406 92354 245 0.895349 2.19360505 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 122 7.22e-34   NR HVF84605.1 2800791 g91395 i0 95.5 0.808163265306122 66 3 80.8 0 243 46 44 109 HVF84605.1 50S ribosomal protein L22 [Abditibacteriaceae bacterium] diamond 198 122 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31193953 31193953 PRJNA944406_P_NODE_109815_length_241_cov_0.916667_g108856_i0 PRJNA944406 109815 241 0.916667 2.20916747 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 108 1.07e-25   NR HEX8553037.1 2800791 g108856 i0 62.5 0.995850622406639 80 30 99.6 0 1 240 37 116 HEX8553037.1 3-phosphoshikimate 1-carboxyvinyltransferase [Abditibacteriaceae bacterium] diamond 240 108 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31257588 31257588 PRJNA944406_P_NODE_57075_length_256_cov_2.278689_g56116_i0 PRJNA944406 57075 256 2.278689 5.83344384 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 164 7.61e-48   NR HEX8550264.1 2800791 g56116 i0 94.1 0.99609375 85 5 99.6 0 255 1 70 154 HEX8550264.1 hypothetical protein [Abditibacteriaceae bacterium] diamond 255 164 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31510838 31510838 PRJNA944406_P_NODE_50116_length_263_cov_1.489474_g49157_i0 PRJNA944406 50116 263 1.489474 3.91731662 Abditibacterium sp. 2109264 Bacteria Bacteria 132 9.409999999999999e-35   NR HEX9998705.1 2109264 g49157 i0 69 2.97718631178707 87 24 99.2 1 2 262 145 228 HEX9998705.1 glycosyltransferase [Abditibacterium sp.] diamond 783 132 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
31731945 31731945 PRJNA944406_P_NODE_75477_length_248_cov_2.537143_g74518_i0 PRJNA944406 75477 248 2.537143 6.29211464 Abditibacterium sp. 2109264 Bacteria Bacteria 89.7 1.13e-18   NR HEX9997851.1 2109264 g74518 i0 60.9 0.774193548387097 64 25 77.4 0 1 192 534 597 HEX9997851.1 M3 family oligoendopeptidase [Abditibacterium sp.] diamond 192 89.7 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
31953409 31953409 PRJNA944406_P_NODE_38517_length_274_cov_1.298507_g37558_i0 PRJNA944406 38517 274 1.298507 3.55790918 Abditibacterium utsteinense 1960156 Bacteria Bacteria 57.8 2.66e-7   NR WP_238596537.1 1960156 g37558 i0 82.9 0.383211678832117 35 6 38.3 0 273 169 356 390 WP_238596537.1 xylose isomerase [Abditibacterium utsteinense] diamond 105 57.8 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
32111709 32111709 PRJNA944406_P_NODE_105598_length_242_cov_0.911243_g104639_i0 PRJNA944406 105598 242 0.911243 2.20520806 Abditibacteriota bacterium 2783868 Bacteria Bacteria 133 5.08e-37   NR BCM92842.1 2783868 g104639 i0 85 0.991735537190083 80 12 99.2 0 241 2 72 151 BCM92842.1 30S ribosomal protein S5 [Abditibacteriota bacterium] diamond 240 133 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
32175232 32175232 PRJNA944406_P_NODE_97618_length_243_cov_1.811765_g96659_i0 PRJNA944406 97618 243 1.811765 4.40258895 Abditibacteriota bacterium 2783868 Bacteria Bacteria 83.6 9.12e-17   NR MDF2440191.1 2783868 g96659 i0 65.5 0.679012345679012 55 19 67.9 0 167 3 77 131 MDF2440191.1 ribose transport system substrate-binding protein [Abditibacteriota bacterium] diamond 165 83.6 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
32270053 32270053 PRJNA944406_P_NODE_100918_length_243_cov_0.905882_g99959_i0 PRJNA944406 100918 243 0.905882 2.20129326 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 141 5.66e-37   NR HEY0076529.1 2800791 g99959 i0 76.3 2.96296296296296 80 19 98.8 0 241 2 688 767 HEY0076529.1 MG2 domain-containing protein [Abditibacteriaceae bacterium] diamond 720 141 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
32396549 32396549 PRJNA944406_P_NODE_111299_length_236_cov_2.349693_g110340_i0 PRJNA944406 111299 236 2.349693 5.54527548 Abditibacterium sp. 2109264 Bacteria Bacteria 129 8.74e-33   NR HEX9995981.1 2109264 g110340 i0 82.1 2.97457627118644 78 14 99.2 0 1 234 597 674 HEX9995981.1 2-oxoglutarate dehydrogenase E1 component [Abditibacterium sp.] diamond 702 129 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
32491593 32491593 PRJNA944406_P_NODE_94119_length_244_cov_0.900585_g93160_i0 PRJNA944406 94119 244 0.900585 2.1974274 Abditibacterium sp. 2109264 Bacteria Bacteria 128 5.5999999999999995e-36   NR HEX8465415.1 2109264 g93160 i0 79 2.98770491803279 81 17 99.6 0 244 2 41 121 HEX8465415.1 cytochrome C oxidase subunit IV family protein [Abditibacterium sp.] diamond 729 128 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
32586430 32586430 PRJNA944406_P_NODE_82879_length_247_cov_0.885057_g81920_i0 PRJNA944406 82879 247 0.885057 2.18609079 Abditibacterium sp. 2109264 Bacteria Bacteria 103 2.34e-24   NR HEX8466063.1 2109264 g81920 i0 76.5 1.96761133603239 81 19 98.4 0 245 3 91 171 HEX8466063.1 decaprenyl-phosphate phosphoribosyltransferase [Abditibacterium sp.] diamond 486 103 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
32750406 32750406 PRJNA944406_P_NODE_63860_length_251_cov_0.865169_g62901_i0 PRJNA944406 63860 251 0.865169 2.17157419 Abditibacterium 2109263 Bacteria Bacteria 95.1 1.2600000000000002e-21   NR WP_105482328.1 1960156 g62901 i0 70.3 2.29482071713147 64 19 76.5 0 249 58 197 260 WP_105482328.1 segregation and condensation protein A [Abditibacterium utsteinense] diamond 576 95.9 0.991657977059437 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;