RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA944406" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 10 ✖

bioproject 1

  • PRJNA944406 · 10 ✖

analysis 1

  • diamond · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6027662 6027662 PRJNA944406_P_NODE_37465_length_275_cov_1.306931_g36506_i0 PRJNA944406 37465 275 1.306931 3.59406025 Halalkalicoccus tibetensis 175632 Archaea Archaea 60.1 2.36e-8   NR WP_340603854.1 175632 g36506 i0 93.9 0.36 33 2 36 0 2 100 60 92 WP_340603854.1 hypothetical protein [Halalkalicoccus tibetensis] diamond 99 60.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis
12403862 12403862 PRJNA944406_P_NODE_56810_length_257_cov_1.298913_g55851_i0 PRJNA944406 56810 257 1.298913 3.33820641 Halalkalicoccus sp. 1973143 Archaea Archaea 151 5.1e-42   NR MEM4782406.1 1973143 g55851 i0 90.6 0.992217898832685 85 8 99.2 0 257 3 26 110 MEM4782406.1 GTP-binding protein [Halalkalicoccus sp.] diamond 255 151 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
27625762 27625762 PRJNA944406_P_NODE_53024_length_260_cov_1.647059_g52065_i0 PRJNA944406 53024 260 1.647059 4.2823534 Candidatus Methanogaster sp. 3386292 Archaea Archaea 55.8 1.15e-6   NR KAF5417137.1 3386292 g52065 i0 57.7 1.65 52 21 60 1 157 2 7 57 KAF5417137.1 MAG: hypothetical protein C5S48_01000 [Candidatus Methanogaster sp.] diamond 429 55.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanogasteraceae Candidatus Methanogaster Candidatus Methanogaster sp.
28636251 28636251 PRJNA944406_P_NODE_99987_length_243_cov_0.905882_g99028_i0 PRJNA944406 99987 243 0.905882 2.20129326 Methanogenium sp. 2196 Archaea Archaea 42.4 0.0184   NR MFA5395176.1 2196 g99028 i0 30.9 0.839506172839506 68 44 84 1 19 222 57 121 MFA5395176.1 hypothetical protein [Methanogenium sp.] diamond 204 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
28762136 28762136 PRJNA944406_P_NODE_101367_length_243_cov_0.905882_g100408_i0 PRJNA944406 101367 243 0.905882 2.20129326 Methanogenium organophilum 2199 Archaea Archaea 46.6 0.00168   NR WP_268186323.1 2199 g100408 i0 29.1 0.975308641975309 79 54 97.5 1 1 237 345 421 WP_268186323.1 hypothetical protein [Methanogenium organophilum] diamond 237 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium organophilum
29109697 29109697 PRJNA944406_P_NODE_26248_length_285_cov_2.250000_g25289_i0 PRJNA944406 26248 285 2.25 6.4125 Halococcus sediminicola 1264579 Archaea Archaea 125 1.7800000000000002e-33   NR WP_049999292.1 1264579 g25289 i0 68.1 0.957894736842105 91 28 94.7 1 3 272 126 216 WP_049999292.1 helix-turn-helix domain-containing protein [Halococcus sediminicola] diamond 273 125 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sediminicola
30278433 30278433 PRJNA944406_P_NODE_113252_length_226_cov_2.013072_g112293_i0 PRJNA944406 113252 226 2.013072 4.54954272 Methanogenium sp. S4BF 1789226 Archaea Archaea 42.4 0.0412   NR WP_278154310.1 1789226 g112293 i0 39.3 0.809734513274336 61 34 79.6 2 38 217 448 506 WP_278154310.1 serine/threonine-protein kinase [Methanogenium sp. S4BF] diamond 183 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp. S4BF
31289140 31289140 PRJNA944406_P_NODE_82435_length_247_cov_0.885057_g81476_i0 PRJNA944406 82435 247 0.885057 2.18609079 Haladaptatus halobius 2884875 Archaea Archaea 64.7 3.6e-11   NR WP_227375586.1 2884875 g81476 i0 50 0.728744939271255 60 30 72.9 0 67 246 47 106 WP_227375586.1 KTSC domain-containing protein [Haladaptatus halobius] diamond 180 64.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus halobius
31479251 31479251 PRJNA944406_P_NODE_86156_length_246_cov_0.890173_g85197_i0 PRJNA944406 86156 246 0.890173 2.18982558 Halosimplex rubrum 869889 Archaea Archaea 42.7 0.0355   NR WP_179908788.1 869889 g85197 i0 36.4 0.804878048780488 66 38 75.6 1 211 26 93 158 WP_179908788.1 polysaccharide deacetylase family protein [Halosimplex rubrum] diamond 198 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex rubrum
32396621 32396621 PRJNA944406_P_NODE_85839_length_246_cov_0.890173_g84880_i0 PRJNA944406 85839 246 0.890173 2.18982558 Halococcus sp. 29286 Archaea Archaea 70.5 3.23e-14   NR HET7325487.1 29286 g84880 i0 81.8 0.536585365853659 44 8 53.7 0 175 44 1 44 HET7325487.1 hypothetical protein [Halococcus sp.] diamond 132 70.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;