RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA944150" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 6 ✖

bioproject 1

  • PRJNA944150 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16561613 16561613 PRJNA944150_P_NODE_29353_length_178_cov_2.744186_g29102_i0 PRJNA944150 29353 178 2.744186 4.88465108 Natronosalvus halobius 2953746 Archaea Archaea 103 2.77e-25   NR WP_253438626.1 2953746 g29102 i0 91.5 0.99438202247191 59 5 99.4 0 178 2 188 246 WP_253438626.1 SDR family oxidoreductase [Natronosalvus halobius] diamond 177 103 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronosalvus Natronosalvus halobius
26613562 26613562 PRJNA944150_P_NODE_45781_length_160_cov_2.522523_g45530_i0 PRJNA944150 45781 160 2.522523 4.0360368 Haloplanus sp. GCM1 1961696 Archaea Archaea 71.2 1.07e-12   NR WP_379799475.1 3252679 g45530 i0 67.9 0.99375 53 17 99.4 0 1 159 375 427 WP_379799475.1 ATP-binding protein [Haloplanus sp. GCM10025708] diamond 159 71.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus sp. GCM10025708
27088624 27088624 PRJNA944150_P_NODE_45682_length_160_cov_3.351351_g45431_i0 PRJNA944150 45682 160 3.351351 5.3621616 Methanofastidiosum sp. 2666341 Archaea Archaea 81.6 2.25e-16   NR HNU62018.1 2666341 g45431 i0 67.3 0.975 52 17 97.5 0 158 3 88 139 HNU62018.1 DnaB-like helicase C-terminal domain-containing protein [Methanofastidiosum sp.] diamond 156 81.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
28415041 28415041 PRJNA944150_P_NODE_37306_length_166_cov_0.880342_g37055_i0 PRJNA944150 37306 166 0.880342 1.46136772 Methanobrevibacter sp. 66852 Archaea Archaea 63.5 1.72e-11   NR MBO7696420.1 66852 g37055 i0 51.9 0.975903614457831 54 25 97.6 1 3 164 12 64 MBO7696420.1 hypothetical protein [Methanobrevibacter sp.] diamond 162 63.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29172857 29172857 PRJNA944150_P_NODE_14389_length_224_cov_7.114286_g14138_i0 PRJNA944150 14389 224 7.114286 15.93600064 Methanofastidiosum sp. 2666341 Archaea Archaea 69.3 1.24e-11   NR HNU62017.1 2666341 g14138 i0 73.2 0.549107142857143 41 11 54.9 0 224 102 108 148 HNU62017.1 hypothetical protein [Methanofastidiosum sp.] diamond 123 69.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
32491528 32491528 PRJNA944150_P_NODE_38659_length_165_cov_1.318966_g38408_i0 PRJNA944150 38659 165 1.318966 2.1762939 Methanofastidiosum sp. 2666341 Archaea Archaea 102 1.13e-23   NR HNU62018.1 2666341 g38408 i0 92.6 0.981818181818182 54 4 98.2 0 163 2 423 476 HNU62018.1 DnaB-like helicase C-terminal domain-containing protein [Methanofastidiosum sp.] diamond 162 102 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;