RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA942359" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA942359 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27783581 27783581 PRJNA942359_P_NODE_19524_length_243_cov_0.917647_g19409_i0 PRJNA942359 19524 243 0.917647 2.22988221 Desulfobacterales bacterium 2044940 Bacteria Bacteria 157 2.7899999999999998e-46   NR MCU0604183.1 2044940 g19409 i0 96.3 1 81 3 100 0 1 243 121 201 MCU0604183.1 tripartite tricarboxylate transporter substrate-binding protein [Desulfobacterales bacterium] diamond 243 157 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
29519912 29519912 PRJNA942359_P_NODE_19370_length_243_cov_0.917647_g19255_i0 PRJNA942359 19370 243 0.917647 2.22988221 Desulfobacterales bacterium 2044940 Bacteria Bacteria 121 7.96e-32   NR MCU0592211.1 2044940 g19255 i0 100 0.802469135802469 65 0 80.2 0 241 47 210 274 MCU0592211.1 ABC transporter permease [Desulfobacterales bacterium] diamond 195 121 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
30095137 30095137 PRJNA942359_P_NODE_13652_length_252_cov_0.871508_g13537_i0 PRJNA942359 13652 252 0.871508 2.19620016 Bacteria 2 Bacteria Bacteria 132 2.12e-35   NR HWP93370.1 2202153 g13537 i0 73.8 7.96428571428571 84 22 100 0 1 252 136 219 HWP93370.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 2007 132 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30562111 30562111 PRJNA942359_P_NODE_19413_length_243_cov_0.917647_g19298_i0 PRJNA942359 19413 243 0.917647 2.22988221 Syntrophobacteraceae bacterium 2052185 Bacteria Bacteria 90.5 5.7e-19   NR HAA02553.1 2052185 g19298 i0 51.3 0.987654320987654 80 39 98.8 0 241 2 179 258 HAA02553.1 primosomal protein N' [Syntrophobacteraceae bacterium] diamond 240 90.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae   Syntrophobacteraceae bacterium
31517532 31517532 PRJNA942359_P_NODE_16096_length_248_cov_0.891429_g15981_i0 PRJNA942359 16096 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 87.4 1.11e-18   NR HYS44187.1 2282154 g15981 i0 77.8 1.69354838709677 54 12 65.3 0 86 247 172 225 HYS44187.1 transposase family protein [Geobacteraceae bacterium] diamond 420 88.2 0.99092970521542 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
31637022 31637022 PRJNA942359_P_NODE_13776_length_252_cov_0.871508_g13661_i0 PRJNA942359 13776 252 0.871508 2.19620016 Candidatus Electrothrix gigas 2202844 Bacteria Bacteria 95.1 6.02e-21   NR MCI5134752.1 2202844 g13661 i0 57.8 0.988095238095238 83 35 98.8 0 1 249 286 368 MCI5134752.1 glycosyltransferase [Candidatus Electrothrix gigas] diamond 249 95.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Candidatus Electrothrix Candidatus Electrothrix gigas
32648792 32648792 PRJNA942359_P_NODE_17080_length_247_cov_0.896552_g16965_i0 PRJNA942359 17080 247 0.896552 2.21448344 Syntrophales bacterium 2928017 Bacteria Bacteria 66.2 2.37e-11   NR MCK9362623.1 2928017 g16965 i0 67.5 0.48582995951417 40 13 48.6 0 122 3 3 42 MCK9362623.1 hypothetical protein [Syntrophales bacterium] diamond 120 66.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;