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contig_metadata

37 rows where analysis = "diamond", bioproject = "PRJNA942359" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 37 ✖

tax_kingdom 1

bioproject 1

  • PRJNA942359 · 37 ✖

analysis 1

  • diamond · 37 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
923170 923170 PRJNA942359_P_NODE_9781_length_283_cov_1.242857_g9666_i0 PRJNA942359 9781 283 1.242857 3.51728531 Bacillus halotolerans 260554 Bacteria Bacteria 174 5.749999999999998e-54   NR MBL6010772.1 260554 g9666 i0 97.9 2.98939929328622 94 2 99.6 0 283 2 45 138 MBL6010772.1 magnesium transporter CorA [Bacillus halotolerans] diamond 846 174 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus halotolerans
9850884 9850884 PRJNA942359_P_NODE_13188_length_253_cov_0.866667_g13073_i0 PRJNA942359 13188 253 0.866667 2.19266751 Peptostreptococcus sp. 1262 Bacteria Bacteria 162 2.0299999999999998e-47   NR WP_332506240.1 1262 g13073 i0 92.9 1.99209486166008 84 6 99.6 0 253 2 78 161 WP_332506240.1 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein [Peptostreptococcus sp.] diamond 504 162 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Peptostreptococcus Peptostreptococcus sp.
22600026 22600026 PRJNA942359_P_NODE_18678_length_244_cov_0.912281_g18563_i0 PRJNA942359 18678 244 0.912281 2.22596564 Pelosinus 365348 Bacteria Bacteria 136 1.72e-36   NR WP_090944918.1 380084 g18563 i0 83.5 2.93852459016393 79 13 97.1 0 239 3 102 180 WP_090944918.1 glycerate kinase [Pelosinus propionicus] diamond 717 137 0.992700729927007 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Sporomusaceae Pelosinus Pelosinus propionicus
25149116 25149116 PRJNA942359_P_NODE_14360_length_251_cov_0.876404_g14245_i0 PRJNA942359 14360 251 0.876404 2.19977404 Paenibacillus sp. HGF5 908341 Bacteria Bacteria 148 1.61e-39   NR WP_009594348.1 908341 g14245 i0 80.7 0.99203187250996006 83 16 99.2 0 250 2 446 528 WP_009594348.1 class I SAM-dependent DNA methyltransferase, partial [Paenibacillus sp. HGF5] diamond 249 148 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus sp. HGF5
26645188 26645188 PRJNA942359_P_NODE_17081_length_247_cov_0.896552_g16966_i0 PRJNA942359 17081 247 0.896552 2.21448344 Enterococcus avium 33945 Bacteria Bacteria 117 9.07e-29   NR WP_311933488.1 33945 g16966 i0 67.9 0.983805668016194 81 26 98.4 0 3 245 228 308 WP_311933488.1 McrB family protein [Enterococcus avium] diamond 243 117 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus avium
27189974 27189974 PRJNA942359_P_NODE_15722_length_249_cov_0.886364_g15607_i0 PRJNA942359 15722 249 0.886364 2.20704636 Lactobacillales 186826 Bacteria Bacteria 128 6.4299999999999995e-37   NR WP_188367612.1 1274384 g15607 i0 95.4 4.69879518072289 65 3 78.3 0 55 249 1 65 WP_188367612.1 VOC family protein, partial [Enterococcus alcedinis] diamond 1170 128 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus alcedinis
27309926 27309926 PRJNA942359_P_NODE_16523_length_248_cov_0.880000_g16408_i0 PRJNA942359 16523 248 0.88 2.1824 uncultured Mogibacterium sp. 278065 Bacteria Bacteria 83.2 1.84e-16   NR WP_298567742.1 278065 g16408 i0 97.6 0.495967741935484 41 1 49.6 0 246 124 383 423 WP_298567742.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB [uncultured Mogibacterium sp.] diamond 123 83.2 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Mogibacterium uncultured Mogibacterium sp.
27348338 27348338 PRJNA942359_P_NODE_15803_length_249_cov_0.886364_g15688_i0 PRJNA942359 15803 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 152 2.8499999999999993e-42   NR MDD7386294.1 1879010 g15688 i0 82.9 5.92771084337349 82 14 98.8 0 3 248 65 146 MDD7386294.1 ABC transporter substrate-binding protein [Bacillota bacterium] diamond 1476 152 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
27348339 27348339 PRJNA942359_P_NODE_17003_length_247_cov_0.896552_g16888_i0 PRJNA942359 17003 247 0.896552 2.21448344 Lactobacillales 186826 Bacteria Bacteria 117 2.18e-29   NR WP_006418788.1 88132 g16888 i0 68.8 10.7125506072874 77 24 93.5 0 247 17 170 246 WP_006418788.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Eremococcus coleocola] diamond 2646 117 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Aerococcaceae Eremococcus Eremococcus coleocola
27404675 27404675 PRJNA942359_P_NODE_19923_length_242_cov_0.923077_g19808_i0 PRJNA942359 19923 242 0.923077 2.23384634 Eubacterium ramulus 39490 Bacteria Bacteria 60.1 2.56e-8   NR WP_333491586.1 39490 g19808 i0 40.5 0.979338842975207 79 32 96.7 3 2 235 153 217 WP_333491586.1 ATP-binding protein [Eubacterium ramulus] diamond 237 60.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Eubacteriaceae Eubacterium Eubacterium ramulus
27600978 27600978 PRJNA942359_P_NODE_13204_length_253_cov_0.866667_g13089_i0 PRJNA942359 13204 253 0.866667 2.19266751 Lactobacillales 186826 Bacteria Bacteria 117 5.53e-29   NR WP_035446293.1 136492 g13089 i0 65.4 1.86166007905138 81 28 96 0 249 7 1 81 WP_035446293.1 PTS transporter subunit EIIC [Atopobacter phocae] diamond 471 117 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Atopobacter Atopobacter phocae
28067543 28067543 PRJNA942359_P_NODE_17265_length_246_cov_1.699422_g17150_i0 PRJNA942359 17265 246 1.699422 4.18057812 Clostridiales bacterium 1898207 Bacteria Bacteria 114 1.32e-29   NR HAT83623.1 1898207 g17150 i0 90 0.731707317073171 60 6 73.2 0 67 246 1 60 HAT83623.1 hypothetical protein [Clostridiales bacterium] diamond 180 114 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
28193677 28193677 PRJNA942359_P_NODE_10366_length_277_cov_1.318627_g10251_i0 PRJNA942359 10366 277 1.318627 3.65259679 Acetatifactor sp. 1872090 Bacteria Bacteria 112 8.93e-27   NR MFG6356137.1 1872090 g10251 i0 89.2 1.38628158844765 65 7 70.4 0 277 83 378 442 MFG6356137.1 ABC transporter permease [Acetatifactor sp.] diamond 384 112 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Acetatifactor Acetatifactor sp.
28604352 28604352 PRJNA942359_P_NODE_14847_length_250_cov_0.881356_g14732_i0 PRJNA942359 14847 250 0.881356 2.20339 Aerococcaceae bacterium NML180378 2954214 Bacteria Bacteria 53.1 3.32e-7   NR MCW6675893.1 2954214 g14732 i0 67.6 1.224 34 11 40.8 0 249 148 22 55 MCW6675893.1 hypothetical protein [Aerococcaceae bacterium NML180378] diamond 306 53.1 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Aerococcaceae   Aerococcaceae bacterium NML180378
28674359 28674359 PRJNA942359_P_NODE_18447_length_245_cov_0.906977_g18332_i0 PRJNA942359 18447 245 0.906977 2.22209365 Bacillales 1385 Bacteria Bacteria 154 3.38e-45   NR WP_120749295.1 400777 g18332 i0 92.6 10.8489795918367 81 6 99.2 0 245 3 138 218 WP_120749295.1 cysteine hydrolase family protein [Paenibacillus ginsengarvi] diamond 2658 154 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus ginsengarvi
28856752 28856752 PRJNA942359_P_NODE_18128_length_245_cov_0.906977_g18013_i0 PRJNA942359 18128 245 0.906977 2.22209365 Globicatella sp. HMSC 62321 Bacteria Bacteria 62.4 3.82e-9   NR WP_071409033.1 1739315 g18013 i0 71.4 0.428571428571429 35 10 42.9 0 108 4 1 35 WP_071409033.1 aspartate-semialdehyde dehydrogenase [Globicatella sp. HMSC072A10] diamond 105 62.4 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Aerococcaceae Globicatella Globicatella sp. HMSC072A10
28951865 28951865 PRJNA942359_P_NODE_15768_length_249_cov_0.886364_g15653_i0 PRJNA942359 15768 249 0.886364 2.20704636 Allofustis seminis 166939 Bacteria Bacteria 49.3 1.97e-4   NR WP_018658802.1 166939 g15653 i0 39.7 0.759036144578313 63 38 75.9 0 249 61 202 264 WP_018658802.1 DUF1538 domain-containing protein [Allofustis seminis] diamond 189 49.3 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Allofustis Allofustis seminis
29046476 29046476 PRJNA942359_P_NODE_15588_length_249_cov_0.886364_g15473_i0 PRJNA942359 15588 249 0.886364 2.20704636 Lachnospiraceae 186803 Bacteria Bacteria 105 3.3e-24   NR WP_235233957.1 186803 g15473 i0 90.6 1.27710843373494 53 5 63.9 0 160 2 259 311 WP_235233957.1 MULTISPECIES: ferrous iron transport protein B [Lachnospiraceae] diamond 318 105 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae    
29148283 29148283 PRJNA942359_P_NODE_13929_length_252_cov_0.871508_g13814_i0 PRJNA942359 13929 252 0.871508 2.19620016 root 1 Root_unresolved Root_unresolved 79.3 8.92e-17   NR WP_252130017.1 1590 g13814 i0 100 69.2142857142857 38 0 45.2 0 84 197 89 126 WP_252130017.1 30S ribosomal protein S30e, partial [Lactiplantibacillus plantarum] diamond 17442 79.3 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Lactiplantibacillus plantarum
29709017 29709017 PRJNA942359_P_NODE_15490_length_249_cov_0.886364_g15375_i0 PRJNA942359 15490 249 0.886364 2.20704636 Clostridiales bacterium 1898207 Bacteria Bacteria 155 3.22e-42   NR MCI6836617.1 1898207 g15375 i0 100 1 83 0 100 0 249 1 367 449 MCI6836617.1 gamma-glutamyltransferase [Clostridiales bacterium] diamond 249 155 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
30088410 30088410 PRJNA942359_P_NODE_18992_length_244_cov_0.912281_g18877_i0 PRJNA942359 18992 244 0.912281 2.22596564 Enterocloster sp. 2719315 Bacteria Bacteria 166 3.48e-50   NR WP_407406826.1 2719315 g18877 i0 100 1.9672131147541 80 0 98.4 0 242 3 23 102 WP_407406826.1 sensor histidine kinase, partial [Enterocloster sp.] diamond 480 166 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster sp.
30119919 30119919 PRJNA942359_P_NODE_3432_length_430_cov_4.915966_g3317_i0 PRJNA942359 3432 430 4.915966 21.1386538 Bacillus cereus 1396 Bacteria Bacteria 221 1.16e-71   NR WP_233724406.1 1396 g3317 i0 100 0.774418604651163 111 0 77.4 0 430 98 31 141 WP_233724406.1 hypothetical protein [Bacillus cereus] diamond 333 221 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus cereus
30341751 30341751 PRJNA942359_P_NODE_18692_length_244_cov_0.912281_g18577_i0 PRJNA942359 18692 244 0.912281 2.22596564 Anaerovibrio sp. 1872532 Bacteria Bacteria 158 1.0299999999999998e-43   NR WP_300092050.1 1872532 g18577 i0 100 0.995901639344262 81 0 99.6 0 1 243 207 287 WP_300092050.1 EAL domain-containing protein [Anaerovibrio sp.] diamond 243 158 1 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Anaerovibrio Anaerovibrio sp.
30373200 30373200 PRJNA942359_P_NODE_13872_length_252_cov_0.871508_g13757_i0 PRJNA942359 13872 252 0.871508 2.19620016 Atopostipes sp. 1872652 Bacteria Bacteria 117 8.739999999999998e-30   NR HLR91600.1 1872652 g13757 i0 69.4 4.01190476190476 85 24 98.8 1 3 251 167 251 HLR91600.1 LCP family protein [Atopostipes sp.] diamond 1011 117 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Atopostipes Atopostipes sp.
30720277 30720277 PRJNA942359_P_NODE_20174_length_242_cov_0.923077_g20059_i0 PRJNA942359 20174 242 0.923077 2.23384634 Zhenpiania hominis 2763644 Bacteria Bacteria 151 7.27e-43   NR WP_187302917.1 2763644 g20059 i0 87.2 5.83884297520661 78 10 96.7 0 236 3 239 316 WP_187302917.1 3'-5' exoribonuclease YhaM family protein [Zhenpiania hominis] diamond 1413 151 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Zhenpiania Zhenpiania hominis
30752042 30752042 PRJNA942359_P_NODE_18434_length_245_cov_0.906977_g18319_i0 PRJNA942359 18434 245 0.906977 2.22209365 Vagococcus carniphilus 218144 Bacteria Bacteria 147 1.31e-41   NR WP_126794804.1 218144 g18319 i0 93.8 1.98367346938776 81 5 99.2 0 244 2 160 240 WP_126794804.1 mechanosensitive ion channel family protein [Vagococcus carniphilus] diamond 486 147 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Vagococcus Vagococcus carniphilus
30846755 30846755 PRJNA942359_P_NODE_15174_length_250_cov_0.881356_g15059_i0 PRJNA942359 15174 250 0.881356 2.20339 Lactobacillus amylovorus 1604 Bacteria Bacteria 157 5.829999999999999e-45   NR WP_342094866.1 1604 g15059 i0 97.4 0.924 77 2 92.4 0 18 248 170 246 WP_342094866.1 hypothetical protein [Lactobacillus amylovorus] diamond 231 157 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus amylovorus
30846758 30846758 PRJNA942359_P_NODE_19934_length_242_cov_0.923077_g19819_i0 PRJNA942359 19934 242 0.923077 2.23384634 Thermicanus aegyptius 94009 Bacteria Bacteria 127 2.74e-33   NR WP_052329861.1 94009 g19819 i0 78.8 0.991735537190083 80 17 99.2 0 241 2 246 325 WP_052329861.1 AI-2E family transporter [Thermicanus aegyptius] diamond 240 127 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
31169291 31169291 PRJNA942359_P_NODE_15355_length_249_cov_0.886364_g15240_i0 PRJNA942359 15355 249 0.886364 2.20704636 Thermicanus 94008 Bacteria Bacteria 65.1 5.29e-10   NR WP_028987986.1 94009 g15240 i0 52.4 1.97590361445783 82 39 98.8 0 3 248 284 365 WP_028987986.1 DUF2325 domain-containing protein [Thermicanus aegyptius] diamond 492 65.1 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
31858416 31858416 PRJNA942359_P_NODE_14637_length_250_cov_2.254237_g14522_i0 PRJNA942359 14637 250 2.254237 5.6355925 Otoolea muris 2941515 Bacteria Bacteria 123 1.8e-34   NR WP_251501043.1 2941515 g14522 i0 90.6 0.768 64 6 76.8 0 194 3 1 64 WP_251501043.1 helix-turn-helix domain-containing protein [Otoolea muris] diamond 192 123 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Otoolea Otoolea muris
31984996 31984996 PRJNA942359_P_NODE_16898_length_247_cov_0.896552_g16783_i0 PRJNA942359 16898 247 0.896552 2.21448344 Clostridia bacterium 2044939 Bacteria Bacteria 73.9 3.6e-13   NR HKL11163.1 2044939 g16783 i0 48.8 0.995951417004049 82 38 96 2 11 247 167 247 HKL11163.1 MFS transporter [Clostridia bacterium] diamond 246 73.9 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
32023579 32023579 PRJNA942359_P_NODE_19858_length_242_cov_0.923077_g19743_i0 PRJNA942359 19858 242 0.923077 2.23384634 Clostridia 186801 Bacteria Bacteria 86.7 9.24e-18   NR WP_207664189.1 2293011 g19743 i0 53.1 3.01239669421488 81 36 97.9 2 5 241 28 108 WP_207664189.1 hypothetical protein, partial [Clostridium sp. AF34-10BH] diamond 729 86.7 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sp. AF34-10BH
32111675 32111675 PRJNA942359_P_NODE_14578_length_251_cov_0.876404_g14463_i0 PRJNA942359 14578 251 0.876404 2.19977404 Peptoniphilus rhinitidis 1175452 Bacteria Bacteria 176 7.709999999999999e-52   NR WP_010247383.1 1175452 g14463 i0 100 0.99203187250996006 83 0 99.2 0 249 1 238 320 WP_010247383.1 iron-containing alcohol dehydrogenase [Peptoniphilus rhinitidis] diamond 249 176 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus rhinitidis
32206609 32206609 PRJNA942359_P_NODE_17518_length_246_cov_0.901734_g17403_i0 PRJNA942359 17518 246 0.901734 2.21826564 Planococcus wigleyi 2762216 Bacteria Bacteria 159 1.96e-48   NR WP_191715716.1 2762216 g17403 i0 98.7 0.914634146341463 75 1 91.5 0 20 244 1 75 WP_191715716.1 hypothetical protein [Planococcus wigleyi] diamond 225 159 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Caryophanaceae Planococcus Planococcus wigleyi
32270014 32270014 PRJNA942359_P_NODE_19058_length_244_cov_0.912281_g18943_i0 PRJNA942359 19058 244 0.912281 2.22596564 Candidatus Atopostipes pullistercoris 2838467 Bacteria Bacteria 161 5.809999999999999e-46   NR HIZ71489.1 2838467 g18943 i0 98.8 0.995901639344262 81 1 99.6 0 2 244 92 172 HIZ71489.1 IS110 family transposase [Candidatus Atopostipes pullistercoris] diamond 243 161 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Atopostipes Candidatus Atopostipes pullistercoris
32459808 32459808 PRJNA942359_P_NODE_14319_length_251_cov_0.876404_g14204_i0 PRJNA942359 14319 251 0.876404 2.19977404 Clostridium chromiireducens 225345 Bacteria Bacteria 138 5.13e-36   NR WP_079439173.1 225345 g14204 i0 91.6 2.97609561752988 83 7 99.2 0 251 3 126 208 WP_079439173.1 ABC transporter ATP-binding protein [Clostridium chromiireducens] diamond 747 138 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium chromiireducens
32648795 32648795 PRJNA942359_P_NODE_19660_length_243_cov_0.917647_g19545_i0 PRJNA942359 19660 243 0.917647 2.22988221 Clostridium 1485 Bacteria Bacteria 42.4 0.0491   NR WP_013240569.1 1485 g19545 i0 37.3 0.827160493827161 67 36 77.8 2 45 233 308 372 WP_013240569.1 MULTISPECIES: 4Fe-4S dicluster domain-containing protein [Clostridium] diamond 201 42.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;