RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA942359" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA942359 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8911724 8911724 PRJNA942359_P_NODE_9687_length_284_cov_1.246445_g9572_i0 PRJNA942359 9687 284 1.246445 3.5399038 Bacteria 2 Bacteria Bacteria 115 2.94e-29   NR MDQ2799150.1 2033014 g9572 i0 54.3 4.96478873239437 94 43 99.3 0 2 283 10 103 MDQ2799150.1 hypothetical protein [Armatimonadota bacterium] diamond 1410 115 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28288425 28288425 PRJNA942359_P_NODE_17466_length_246_cov_0.901734_g17351_i0 PRJNA942359 17466 246 0.901734 2.21826564 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 103 7.62e-25   NR MBV6503147.1 2682145 g17351 i0 100 0.51219512195122 42 0 51.2 0 246 121 210 251 MBV6503147.1 Endonuclease III [Fimbriimonadales bacterium] diamond 126 103 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;