RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA942359" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 6 ✖

bioproject 1

  • PRJNA942359 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23875330 23875330 PRJNA942359_P_NODE_11499_length_266_cov_1.259067_g11384_i0 PRJNA942359 11499 266 1.259067 3.34911822 uncultured Caudovirales phage 2100421 Viruses Viruses 72 2.42e-12   NR CAB4126720.1 2100421 g11384 i0 33.3 0.981203007518797 87 58 98.1 0 1 261 387 473 CAB4126720.1 baseplate wedge subunit [uncultured Caudovirales phage] diamond 261 72 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
27246484 27246484 PRJNA942359_P_NODE_13963_length_252_cov_0.871508_g13848_i0 PRJNA942359 13963 252 0.871508 2.19620016 Alishewanella phage vB_AspM_Slickus 3038239 Viruses Viruses 80.1 1.12e-15   NR WGH49817.1 3038239 g13848 i0 53.1 0.964285714285714 81 36 96.4 1 2 244 137 215 WGH49817.1 thymidylate synthase/pyrimidine hydroxymethylase-like protein [Alishewanella phage vB_AspM_Slickus01] diamond 243 80.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Alishewanella phage vB_AspM_Slickus01
27594108 27594108 PRJNA942359_P_NODE_16764_length_247_cov_0.896552_g16649_i0 PRJNA942359 16764 247 0.896552 2.21448344 Bordetella phage PY223 3118915 Viruses Viruses 84.3 2.09e-19   NR WVR18308.1 3118915 g16649 i0 71.9 0.692307692307692 57 16 69.2 0 245 75 16 72 WVR18308.1 hypothetical protein y223_00028 [Bordetella phage PY223] diamond 171 84.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Bordetella phage PY223
29488216 29488216 PRJNA942359_P_NODE_18910_length_244_cov_0.912281_g18795_i0 PRJNA942359 18910 244 0.912281 2.22596564 Cellulophaga phage phi14:2 1327990 Viruses Viruses 52 2.14e-5   NR YP_008242289.1 1327990 g18795 i0 30.9 0.995901639344262 81 56 99.6 0 243 1 737 817 YP_008242289.1 RNA polymerase accociated protein [Cellulophaga phage phi14:2] diamond 243 52 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Crassvirales Steigviridae Akihdevirus Akihdevirus balticus
29804055 29804055 PRJNA942359_P_NODE_18151_length_245_cov_0.906977_g18036_i0 PRJNA942359 18151 245 0.906977 2.22209365 Caudoviricetes sp. 2832643 Viruses Viruses 128 1.96e-36   NR AXF52379.1 2832643 g18036 i0 97.1 0.844897959183673 69 2 84.5 0 209 3 1 69 AXF52379.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 207 128 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32016665 32016665 PRJNA942359_P_NODE_18338_length_245_cov_0.906977_g18223_i0 PRJNA942359 18338 245 0.906977 2.22209365 Caudoviricetes sp. 2832643 Viruses Viruses 72.4 1.92e-13   NR DAG56998.1 2832643 g18223 i0 74.5 0.575510204081633 47 12 57.6 0 142 2 114 160 DAG56998.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 141 72.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;